RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 TNFRSF1BP20333 461 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 CPOXP36551 454 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 CLK1P49759 484 aaKnown RBP14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 MAP2K6P52564 334 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 CSNK2A1P68400 391 aaPredicted RBP14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 OR1Q1Q15612 314 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 ELOA3BQ3SY89 546 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 ALG10BQ5I7T1 473 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 TMPPEQ6ZT21 453 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 MAMDC2Q7Z304 686 aaPredicted RBP14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 CARM1Q86X55 608 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 ELOA3Q8NG57 546 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 RNF122Q9H9V4 155 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 ADPRHL2Q9NX46 363 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 SELENONQ9NZV5 590 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 HDGFL3Q9Y3E1 203 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 DOCK7Q96N67 2140 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 PCNX1Q96RV3 2341 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 DOPEY2Q9Y3R5 2298 aa14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 CPSF4LA6NMK7 179 aaKnown RBP14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 TMEM229AB2RXF0 380 aa14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 PRSS44E7EML9 344 aa14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 FMO6PO60774 539 aa14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 GMNNO75496 209 aa14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 UBOX5O94941 541 aa14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 PLGP00747 810 aaPredicted RBP14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 SERPINA1P01009 418 aa14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 HTR1EP28566 365 aa14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 OPRM1P35372 400 aa14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 OR2B6P58173 313 aa14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 RAC3P60763 192 aa14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 SIRPAP78324 504 aa14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 ULK3Q6PHR2 472 aa14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 MCEMP1Q8IX19 187 aa14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 CNEP1R1Q8N9A8 125 aa14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 DNAJA4Q8WW22 397 aaPredicted RBP14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 LZICQ8WZA0 190 aa14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 SFXN3Q9BWM7 321 aa14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 KCNJ16Q9NPI9 418 aa14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 ZNF629Q9UEG4 869 aaPredicted RBP14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 CLEC4AQ9UMR7 237 aa14.22□□□□□ -0.13
CCDC28A-201ENST00000332797 A0A0B4J2E0 115 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 A0A1B0GX12 115 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 A0A1W2PNV4 684 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 A8MVM7 634 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 PMS2P2O95744 297 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 HSD17B1P14061 328 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 ENPP1P22413 925 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 IDUAP35475 653 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 MSX2P35548 267 aaPredicted RBP14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 OR1E2P47887 323 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 SELENOWP63302 87 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 SLC25A35Q3KQZ1 300 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 ENTPD8Q5MY95 495 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 GLYATQ6IB77 296 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 C6orf89Q6UWU4 347 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 DEF8Q6ZN54 512 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 FCRLAQ7L513 359 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 RELL2Q8NC24 303 aaPredicted RBP14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 RNF128Q8TEB7 428 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 ZHX1-C8orf76Q96EF9 292 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 SLC47A1Q96FL8 570 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 C12orf10Q9HB07 376 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 PLEKHB1Q9UF11 243 aaPredicted RBP14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 CD300AQ9UGN4 299 aa14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 KLF2Q9Y5W3 355 aaPredicted RBP14.21□□□□□ -0.13
CCDC28A-201ENST00000332797 SPTAN1Q13813 2472 aaKnown RBP14.21□□□□□ -0.14
CCDC28A-201ENST00000332797 EEF1E1-BLOC1S5C9J1V9 151 aa14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 SMAD9O15198 467 aaKnown RBP14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 EEF1E1O43324 174 aaKnown RBP14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 IL18BPO95998 194 aa14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 CRHP06850 196 aa14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 PNMTP11086 282 aa14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 IMPDH2P12268 514 aa14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 KLK2P20151 261 aa14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 CDH12P55289 794 aa14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 CEACAM7Q14002 265 aa14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 C1orf140Q5VVS0 124 aa14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 ZNF613Q6PF04 617 aa14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 CBLL1Q75N03 491 aa14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 VTCN1Q7Z7D3 282 aa14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 ABHD3Q8WU67 409 aa14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 GMPPAQ96IJ6 420 aaPredicted RBP14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 HSH2DQ96JZ2 352 aa14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 POTEKPQ9BYX7 375 aa14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 MAGEL2Q9UJ55 1249 aa14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 MED12LQ86YW9 2145 aa14.2□□□□□ -0.14
CCDC28A-201ENST00000332797 TNFSF13O75888 250 aa14.19□□□□□ -0.14
CCDC28A-201ENST00000332797 PTNP21246 168 aa14.19□□□□□ -0.14
CCDC28A-201ENST00000332797 GRNP28799 593 aaKnown RBP14.19□□□□□ -0.14
CCDC28A-201ENST00000332797 CTBP2P56545 445 aa14.19□□□□□ -0.14
CCDC28A-201ENST00000332797 RNPS1Q15287 305 aaKnown RBP14.19□□□□□ -0.14
CCDC28A-201ENST00000332797 SWT1Q5T5J6 900 aaKnown RBP14.19□□□□□ -0.14
CCDC28A-201ENST00000332797 GTF2IRD2BQ6EKJ0 949 aa14.19□□□□□ -0.14
CCDC28A-201ENST00000332797 VWA1Q6PCB0 445 aa14.19□□□□□ -0.14
CCDC28A-201ENST00000332797 GTF2IRD2Q86UP8 949 aa14.19□□□□□ -0.14
CCDC28A-201ENST00000332797 TSPYL5Q86VY4 417 aaPredicted RBP14.19□□□□□ -0.14
CCDC28A-201ENST00000332797 STK35Q8TDR2 534 aa14.19□□□□□ -0.14
CCDC28A-201ENST00000332797 ADAMTS16Q8TE57 1224 aa14.19□□□□□ -0.14
CCDC28A-201ENST00000332797 SLC38A4Q969I6 547 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms