RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 CFAP54Q96N23 3096 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 TRBV11-1A0A0K0K1C0 115 aa18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 TMEM200CA6NKL6 621 aa18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 ALG1L2C9J202 215 aa18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 DLGAP3O95886 979 aa18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 SLC26A5P58743 744 aa18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 CRYZQ08257 329 aaKnown RBP18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 KRR1Q13601 381 aaKnown RBP18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 SPANXN2Q5MJ10 180 aa18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 RNLSQ5VYX0 342 aa18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 ZNF517Q6ZMY9 492 aaPredicted RBP18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 GALNT6Q8NCL4 622 aa18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 OR2T33Q8NG76 320 aa18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 NUBPLQ8TB37 319 aa18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 SDHCQ99643 169 aaPredicted RBP18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 LAT2Q9GZY6 243 aa18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 AKAP7Q9P0M2 348 aaPredicted RBP18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 C19orf25Q9UFG5 118 aaPredicted RBP18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 NXT1Q9UKK6 140 aaKnown RBP18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 SIGLEC7Q9Y286 467 aa18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 CAB39Q9Y376 341 aaPredicted RBP18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 RPL36Q9Y3U8 105 aaKnown RBP18.52■□□□□ 0.56
RIPPLY3-201ENST00000329553 A0A1W2PQD3 144 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 LOC110117498-PIK3R3F6TDL0 507 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 SURF4O15260 269 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 PTP4A3O75365 173 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 CSO75390 466 aaKnown RBP18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 CYC1P08574 325 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 TPTEP56180 551 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 NRG3P56975 720 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 ZNF117Q03924 483 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 ZNF91Q05481 1191 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 WBP2NLQ6ICG8 309 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 GDPGP1Q6ZNW5 385 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 CACTIN-AS1Q8N1I8 211 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 FANK1Q8TC84 345 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 EDEM2Q9BV94 578 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 CLEC2DQ9UHP7 191 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 LOXL2Q9Y4K0 774 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 WWP2O00308 870 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 CTDSP2O14595 271 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 NDUFB5O43674 189 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 INSM1Q01101 510 aaPredicted RBP18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 THSD4Q6ZMP0 1018 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 OR51A7Q8NH64 312 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 TBL1XR1Q9BZK7 514 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 ICAM5Q9UMF0 924 aa18.51■□□□□ 0.55
RIPPLY3-201ENST00000329553 TRAV27A0A087WT01 109 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 OR6C70A6NIJ9 312 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 SNPHO15079 494 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 GMFGO60234 142 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 FADS1O60427 444 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 KLF7O75840 302 aaPredicted RBP18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 UMODP07911 640 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 BMP7P18075 431 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 MST1P26927 711 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 SPEM2Q0P670 501 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 SPHARQ15513 63 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 SUMF1Q8NBK3 374 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 PRRG3Q9BZD7 231 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 CRNNQ9UBG3 495 aaPredicted RBP18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 PTRH2Q9Y3E5 179 aaKnown RBP18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 PMS2P1A4D2B8 440 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 HCRTR2O43614 444 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 RCBTB2O95199 551 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 SLC2A10O95528 541 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 SOX3P41225 446 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 DCAF12Q5T6F0 453 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 GDPD3Q7L5L3 318 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 NANOGP1Q8N7R0 232 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 ANKK1Q8NFD2 765 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 CHAC2Q8WUX2 184 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 TNFRSF13CQ96RJ3 184 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 KCNS3Q9BQ31 491 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 SLC30A2Q9BRI3 323 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 CCDC32Q9BV29 185 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 MND1Q9BWT6 205 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 ASPNQ9BXN1 380 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 TEX12Q9BXU0 123 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 ITGB1BP2Q9UKP3 347 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 TRAPPC4Q9Y296 219 aa18.5■□□□□ 0.55
RIPPLY3-201ENST00000329553 C9J4A7 227 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 BHLHE40O14503 412 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 PPM1BO75688 479 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 EVI2BP34910 448 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 CRYBB2P43320 205 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 PSPHP78330 225 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 FHL1Q13642 323 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 SMARCD3Q6STE5 483 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 ATG4DQ86TL0 474 aaPredicted RBP18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 OAFQ86UD1 273 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 OR52L1Q8NGH7 329 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 OR5M3Q8NGP4 307 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 OR8K3Q8NH51 312 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 TMEM9BQ9NQ34 198 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 SEC14L4Q9UDX3 406 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 PCNX3Q9H6A9 2034 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 LOC102723996A0A087X1L8 192 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 SCO2O43819 266 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 HCN1O60741 890 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms