RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 TGM3Q08188 693 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 NUMA1Q14980 2115 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 MPPED2Q15777 294 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 GUCA2BQ16661 112 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 ZNF750Q32MQ0 723 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 TMEM69Q5SWH9 247 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 PWWP2BQ6NUJ5 590 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 UNQ9370/PRO34162Q6UXP9 181 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 TMEM185AQ8NFB2 350 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 HS6ST2Q96MM7 605 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 SLC25A18Q9H1K4 315 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 CCDC86Q9H6F5 360 aaKnown RBP11.79□□□□□ -0.52
CCDC60-201ENST00000327554 POT1Q9NUX5 634 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 GLOD5A6NK44 160 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 RFPL4AA6NLU0 287 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 RFPL4AL1F8VTS6 287 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 ACOT7O00154 380 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 CKMP06732 381 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 CLTBP09497 229 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 ADCYAP1P18509 176 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 PVALBP20472 110 aaPredicted RBP11.79□□□□□ -0.52
CCDC60-201ENST00000327554 RORAP35398 523 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 ELAVL2Q12926 359 aaKnown RBP11.79□□□□□ -0.52
CCDC60-201ENST00000327554 CCDC157Q569K6 752 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 TXNDC8Q6A555 127 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 WDR88Q6ZMY6 472 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 DNM1P46Q6ZS02 220 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 C1orf216Q8TAB5 229 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 SYNPRQ8TBG9 265 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 ARMC5Q96C12 935 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 LRIG1Q96JA1 1093 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 CASD1Q96PB1 797 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 MS4A4EQ96PG1 132 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 BBS4Q96RK4 519 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 ADAT1Q9BUB4 502 aaKnown RBP11.79□□□□□ -0.52
CCDC60-201ENST00000327554 NOX4Q9NPH5 578 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 C20orf141Q9NUB4 165 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 KLHL28Q9NXS3 571 aa11.79□□□□□ -0.52
CCDC60-201ENST00000327554 LRRK1Q38SD2 2015 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 A0A0A6YYD5 115 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 FAM86C2PA6NEL3 165 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 MAN2B1O00754 1011 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 FCMRO60667 390 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 GYPBP06028 91 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 ASGR1P07306 291 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 SRMP19623 302 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 CDK2P24941 298 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 NTSP30990 170 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 ACTC1P68032 377 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 ACTA1P68133 377 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 CRMP1Q14194 572 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 RBMS2Q15434 407 aaKnown RBP11.78□□□□□ -0.52
CCDC60-201ENST00000327554 CYB561A3Q8NBI2 242 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 DMBX1Q8NFW5 382 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 PFN4Q8NHR9 129 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 SFT2D1Q8WV19 159 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 S100A16Q96FQ6 103 aaKnown RBP11.78□□□□□ -0.52
CCDC60-201ENST00000327554 CD180Q99467 661 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 PDCD1LG2Q9BQ51 273 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 TRMT61BQ9BVS5 477 aaKnown RBP11.78□□□□□ -0.52
CCDC60-201ENST00000327554 HAO2Q9NYQ3 351 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 OR5V1Q9UGF6 321 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 YIPF1Q9Y548 306 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 A0A1W2PS29 197 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 TMEM218A2RU14 115 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 GALTP07902 379 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 BMP7P18075 431 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 ACADLP28330 430 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 MNDAP41218 407 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 KCNJ3P48549 501 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 PRMT2P55345 433 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 TAS2R20P59543 309 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 UBE2IP63279 158 aaKnown RBP11.78□□□□□ -0.52
CCDC60-201ENST00000327554 DCDP81605 110 aaKnown RBP11.78□□□□□ -0.52
CCDC60-201ENST00000327554 TNFRSF17Q02223 184 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 SMAD2Q15796 467 aaKnown RBP11.78□□□□□ -0.52
CCDC60-201ENST00000327554 ARSIQ5FYB1 569 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 DHRS7BQ6IAN0 325 aaPredicted RBP11.78□□□□□ -0.52
CCDC60-201ENST00000327554 UQCC3Q6UW78 93 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 C17orf64Q86WR6 236 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 SVBPQ8N300 66 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 OR2A12Q8NGT7 310 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 CMSS1Q9BQ75 279 aaKnown RBP11.78□□□□□ -0.52
CCDC60-201ENST00000327554 AIF1LQ9BQI0 150 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 FAM117AQ9C073 453 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 ZDHHC5Q9C0B5 715 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 PIGMQ9H3S5 423 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 CACYBPQ9HB71 228 aaKnown RBP11.78□□□□□ -0.52
CCDC60-201ENST00000327554 TAC3Q9UHF0 121 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 ADAM29Q9UKF5 820 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 SLC35A3Q9Y2D2 325 aa11.78□□□□□ -0.52
CCDC60-201ENST00000327554 OR2W5A6NFC9 320 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 ERAL1O75616 437 aaKnown RBP11.77□□□□□ -0.53
CCDC60-201ENST00000327554 EIF3GO75821 320 aaKnown RBP eCLIP11.77□□□□□ -0.53
CCDC60-201ENST00000327554 OLFM2O95897 454 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 RLN1P04808 185 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 IFNA4P05014 189 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 ACAA1P09110 424 aaPredicted RBP11.77□□□□□ -0.53
CCDC60-201ENST00000327554 SPP1P10451 314 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 TIMP2P16035 220 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms