RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 NLKQ9UBE8 527 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 BAIAP2Q9UQB8 552 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 SPEGQ15772 3267 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 A0A087WV62 115 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 C7orf66A4D0T2 115 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 FITM1A5D6W6 292 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 FRS3O43559 492 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 TPST2O60704 377 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 SNAPC5O75971 98 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 NSA2O95478 260 aaKnown RBP12.04□□□□□ -0.48
CPNE1-201ENST00000317677 LALBAP00709 142 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 H2AFB1P0C5Y9 115 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 H2AFB2P0C5Z0 115 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 S1PR1P21453 382 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 PSMA1P25786 263 aaKnown RBP12.04□□□□□ -0.48
CPNE1-201ENST00000317677 ELAVL4P26378 380 aaKnown RBP12.04□□□□□ -0.48
CPNE1-201ENST00000317677 CD1CP29017 333 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 PPM1FP49593 454 aaPredicted RBP12.04□□□□□ -0.48
CPNE1-201ENST00000317677 FAM53BQ14153 422 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 AMZ1Q400G9 498 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 TRIQKQ629K1 86 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 OR5M11Q96RB7 305 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 ARHGDIGQ99819 225 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 PINK1Q9BXM7 581 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 PDE7BQ9NP56 450 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 SNTG1Q9NSN8 517 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 MAN2C1Q9NTJ4 1040 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 FBXO34Q9NWN3 711 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 PILRBQ9UKJ0 227 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 CLCA2Q9UQC9 943 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 UNC13CQ8NB66 2214 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 FER1L5A0AVI2 2057 aa12.04□□□□□ -0.48
CPNE1-201ENST00000317677 LY6G6EA0A0G2JKS1 128 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 SLC22A23A1A5C7 686 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 MPTX1A8MV57 137 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 HRKO00198 91 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 CDC123O75794 336 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-201ENST00000317677 GASTP01350 101 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 SLC2A2P11168 524 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-201ENST00000317677 PIPP12273 146 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-201ENST00000317677 GLB1P16278 677 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 BTG2P78543 158 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 IGLV3-21P80748 117 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-201ENST00000317677 LSM11P83369 360 aaKnown RBP eCLIP12.03□□□□□ -0.48
CPNE1-201ENST00000317677 PIN1Q13526 163 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-201ENST00000317677 ARHGAP11BQ3KRB8 267 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 LGALSLQ3ZCW2 172 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-201ENST00000317677 PRAMEF17Q5VTA0 474 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 LUZP2Q86TE4 346 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 ZDHHC12Q96GR4 267 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 CD180Q99467 661 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 TMEM43Q9BTV4 400 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 MED28Q9H204 178 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 ZNF226Q9NYT6 803 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 PLEKHB1Q9UF11 243 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-201ENST00000317677 CLCA3PQ9Y6N3 262 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 U3KQA8 63 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 A0A0B4J203 849 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 A0A1B0GVI7 797 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 CCNB2O95067 398 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 SLC35E2P0CK97 266 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 ANXA3P12429 323 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 RNH1P13489 461 aaKnown RBP12.03□□□□□ -0.48
CPNE1-201ENST00000317677 ANXA8P13928 327 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 POU2F1P14859 743 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 EPHA8P29322 1005 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-201ENST00000317677 GCGRP47871 477 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 FCN2Q15485 313 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 PLK5Q496M5 336 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 FAM209BQ5JX69 171 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 CD276Q5ZPR3 534 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 PLAG1Q6DJT9 500 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 FIP1L1Q6UN15 594 aaKnown RBP12.03□□□□□ -0.48
CPNE1-201ENST00000317677 TMPRSS9Q7Z410 1059 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 MS4A15Q8N5U1 240 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 OR11H4Q8NGC9 324 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 HOXB13Q92826 284 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-201ENST00000317677 GTPBP3Q969Y2 492 aaKnown RBP12.03□□□□□ -0.48
CPNE1-201ENST00000317677 SDF2Q99470 211 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 SAV1Q9H4B6 383 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-201ENST00000317677 EMC3Q9P0I2 261 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 SEMA5BQ9P283 1151 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 KCNE5Q9UJ90 142 aa12.03□□□□□ -0.48
CPNE1-201ENST00000317677 CEP250Q9BV73 2442 aa12.02□□□□□ -0.48
CPNE1-201ENST00000317677 GXYLT2A0PJZ3 443 aa12.02□□□□□ -0.49
CPNE1-201ENST00000317677 ARRDC5A6NEK1 342 aa12.02□□□□□ -0.49
CPNE1-201ENST00000317677 IFI6P09912 130 aa12.02□□□□□ -0.49
CPNE1-201ENST00000317677 MED22Q15528 200 aa12.02□□□□□ -0.49
CPNE1-201ENST00000317677 MAPK14Q16539 360 aa12.02□□□□□ -0.49
CPNE1-201ENST00000317677 NDUFA9Q16795 377 aa12.02□□□□□ -0.49
CPNE1-201ENST00000317677 ZNF311Q5JNZ3 666 aa12.02□□□□□ -0.49
CPNE1-201ENST00000317677 NHLRC3Q5JS37 347 aa12.02□□□□□ -0.49
CPNE1-201ENST00000317677 RNLSQ5VYX0 342 aa12.02□□□□□ -0.49
CPNE1-201ENST00000317677 RGS7BPQ6MZT1 257 aaPredicted RBP12.02□□□□□ -0.49
CPNE1-201ENST00000317677 SLC34A3Q8N130 599 aa12.02□□□□□ -0.49
CPNE1-201ENST00000317677 Q8N402 240 aa12.02□□□□□ -0.49
CPNE1-201ENST00000317677 EIF4E3Q8N5X7 224 aaKnown RBP12.02□□□□□ -0.49
CPNE1-201ENST00000317677 AQP11Q8NBQ7 271 aa12.02□□□□□ -0.49
CPNE1-201ENST00000317677 OR6C4Q8NGE1 309 aa12.02□□□□□ -0.49
CPNE1-201ENST00000317677 SLC7A13Q8TCU3 470 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms