RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 IFNGP01579 166 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 ZNF3P17036 446 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 HK1P19367 917 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 FUT1P19526 365 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 CAPZA2P47755 286 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 TRAM1Q15629 374 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 TRIP6Q15654 476 aaKnown RBP13.02□□□□□ -0.32
VRK3-201ENST00000316763 KCNJ8Q15842 424 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 RSBN1Q5VWQ0 802 aaPredicted RBP13.02□□□□□ -0.32
VRK3-201ENST00000316763 GPALPP1Q8IXQ4 340 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 SLC37A3Q8NCC5 494 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 OR13C2Q8NGS9 318 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 ADAMTS18Q8TE60 1221 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 GRHL3Q8TE85 626 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 CNOT9Q92600 299 aaKnown RBP13.02□□□□□ -0.32
VRK3-201ENST00000316763 SLC35B4Q969S0 331 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 MVB12AQ96EY5 273 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 RBM18Q96H35 190 aaKnown RBP13.02□□□□□ -0.32
VRK3-201ENST00000316763 MED20Q9H944 212 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 TRIM36Q9NQ86 728 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 FGF21Q9NSA1 209 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 CUTCQ9NTM9 273 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 SLC35A3Q9Y2D2 325 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 TMEM184BQ9Y519 407 aaPredicted RBP13.02□□□□□ -0.32
VRK3-201ENST00000316763 SMIM30A4D0T7 59 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 CCDC182A6NF36 153 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 CD8B2A6NJW9 211 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 NTN3O00634 580 aaPredicted RBP13.01□□□□□ -0.33
VRK3-201ENST00000316763 MT-ND5P03915 603 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 GP1BAP07359 652 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 CSF3P09919 207 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 CD8BP10966 210 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 CD53P19397 219 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 SLC6A6P31641 620 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 RPS5P46782 204 aaKnown RBP13.01□□□□□ -0.33
VRK3-201ENST00000316763 RFX2P48378 723 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 PSMD4P55036 377 aaKnown RBP13.01□□□□□ -0.33
VRK3-201ENST00000316763 TAS2R43P59537 309 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 STX4Q12846 297 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 TAB1Q15750 504 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 LCN1P1Q5VSP4 162 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 YOD1Q5VVQ6 348 aaPredicted RBP13.01□□□□□ -0.33
VRK3-201ENST00000316763 RTL4Q6ZR62 310 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 ZNF550Q7Z398 422 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 SCAIQ8N9R8 606 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 OR10H4Q8NGA5 316 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 ACOT12Q8WYK0 555 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 RIT1Q92963 219 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 ATF6BQ99941 703 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 NDC1Q9BTX1 674 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 HCN3Q9P1Z3 774 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 RPS6KB2Q9UBS0 482 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 SERTAD3Q9UJW9 196 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 SPEGQ15772 3267 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 DMXL1Q9Y485 3027 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 LINC00854A0A1B0GVQ3 168 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 A0A1B0GWA3 101 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 GTPBP1O00178 669 aaKnown RBP13.01□□□□□ -0.33
VRK3-201ENST00000316763 ZNF749O43361 778 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 SLC19A2O60779 497 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 PTP4A3O75365 173 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 F8A1P23610 371 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 NOS3P29474 1203 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 MTNR1BP49286 362 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 SLC16A1P53985 500 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 CAV3P56539 151 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 POU4F2Q12837 409 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 CCDC157Q569K6 752 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 THSD4Q6ZMP0 1018 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 MED25Q71SY5 747 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 ZAR1Q86SH2 424 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 GLRX5Q86SX6 157 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 OAFQ86UD1 273 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 ZNF595Q8IYB9 648 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 GPR135Q8IZ08 494 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 TMEM99Q8N816 258 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 C19orf18Q8NEA5 215 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 SLC2A12Q8TD20 617 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 MMABQ96EY8 250 aaPredicted RBP13.01□□□□□ -0.33
VRK3-201ENST00000316763 NEDD4LQ96PU5 975 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 TEAD3Q99594 435 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 ENKD1Q9H0I2 346 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 OR51V1Q9H2C8 321 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 ISG20L2Q9H9L3 353 aaKnown RBP13.01□□□□□ -0.33
VRK3-201ENST00000316763 ZNF221Q9UK13 617 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 SPTBP11277 2137 aa13.01□□□□□ -0.33
VRK3-201ENST00000316763 CLDN4O14493 209 aa13□□□□□ -0.33
VRK3-201ENST00000316763 CTNSO60931 367 aa13□□□□□ -0.33
VRK3-201ENST00000316763 CSRP1P21291 193 aaKnown RBP13□□□□□ -0.33
VRK3-201ENST00000316763 S1PR1P21453 382 aa13□□□□□ -0.33
VRK3-201ENST00000316763 HTR3AP46098 478 aa13□□□□□ -0.33
VRK3-201ENST00000316763 MAT1AQ00266 395 aaKnown RBP13□□□□□ -0.33
VRK3-201ENST00000316763 PSG6Q00889 435 aa13□□□□□ -0.33
VRK3-201ENST00000316763 TRIQKQ629K1 86 aa13□□□□□ -0.33
VRK3-201ENST00000316763 ARHGAP11AQ6P4F7 1023 aa13□□□□□ -0.33
VRK3-201ENST00000316763 CNIH2Q6PI25 160 aa13□□□□□ -0.33
VRK3-201ENST00000316763 DGAT2L6Q6ZPD8 337 aa13□□□□□ -0.33
VRK3-201ENST00000316763 SLITRK4Q8IW52 837 aa13□□□□□ -0.33
VRK3-201ENST00000316763 LSMEM1Q8N8F7 131 aa13□□□□□ -0.33
VRK3-201ENST00000316763 OR51A7Q8NH64 312 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms