RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 EXOSC3Q9NQT5 275 aaKnown RBP15.34■□□□□ 0.05
EXOSC4-201ENST00000316052 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.34■□□□□ 0.05
EXOSC4-201ENST00000316052 ASB6Q9NWX5 421 aa15.34■□□□□ 0.05
EXOSC4-201ENST00000316052 MALT1Q9UDY8 824 aa15.34■□□□□ 0.05
EXOSC4-201ENST00000316052 MALRD1Q5VYJ5 2156 aa15.34■□□□□ 0.05
EXOSC4-201ENST00000316052 TMED7-TICAM2A0A0A6YYA0 188 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 PDLIM1O00151 329 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 GPR171O14626 319 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 DNPH1O43598 174 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 MYZAPP0CAP1 466 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 IMPDH2P12268 514 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 PTAFRP25105 342 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 CHI3L1P36222 383 aaPredicted RBP15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 CLK1P49759 484 aaKnown RBP15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 KHKP50053 298 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 RPL14P50914 215 aaKnown RBP15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 SYPL1Q16563 259 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 NRF1Q16656 503 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 RNF130Q86XS8 419 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 ANKFN1Q8N957 763 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 VPS37AQ8NEZ2 397 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 TEX37Q96LM6 180 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 ADAD1Q96M93 576 aaKnown RBP15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 SLC35A5Q9BS91 424 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 TMEM109Q9BVC6 243 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 CBLN4Q9NTU7 201 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 TAS2R16Q9NYV7 291 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 TMEM181Q9P2C4 612 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 MARCOQ9UEW3 520 aaPredicted RBP15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 OSGIN1Q9UJX0 560 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 MGAT4BQ9UQ53 548 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 TRAPPC4Q9Y296 219 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 TMED7Q9Y3B3 224 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 RAP2CQ9Y3L5 183 aa15.33■□□□□ 0.04
EXOSC4-201ENST00000316052 TMEM72A0PK05 275 aa15.32■□□□□ 0.04
EXOSC4-201ENST00000316052 FAM234BA2RU67 622 aa15.32■□□□□ 0.04
EXOSC4-201ENST00000316052 M0R1B8 84 aa15.32■□□□□ 0.04
EXOSC4-201ENST00000316052 DHRS4L1P0CG22 281 aa15.32■□□□□ 0.04
EXOSC4-201ENST00000316052 FKBP2P26885 142 aaKnown RBP15.32■□□□□ 0.04
EXOSC4-201ENST00000316052 MAGEA8P43361 318 aa15.32■□□□□ 0.04
EXOSC4-201ENST00000316052 SLC1A6P48664 564 aa15.32■□□□□ 0.04
EXOSC4-201ENST00000316052 NUDT6P53370 316 aa15.32■□□□□ 0.04
EXOSC4-201ENST00000316052 NME5P56597 212 aa15.32■□□□□ 0.04
EXOSC4-201ENST00000316052 FAM174BQ3ZCQ3 159 aa15.32■□□□□ 0.04
EXOSC4-201ENST00000316052 C9orf135Q5VTT2 229 aa15.32■□□□□ 0.04
EXOSC4-201ENST00000316052 KLHL17Q6TDP4 642 aa15.32■□□□□ 0.04
EXOSC4-201ENST00000316052 MUC15Q8N387 334 aa15.32■□□□□ 0.04
EXOSC4-201ENST00000316052 CCDC115Q96NT0 180 aa15.32■□□□□ 0.04
EXOSC4-201ENST00000316052 NUF2Q9BZD4 464 aa15.32■□□□□ 0.04
EXOSC4-201ENST00000316052 SLC38A1Q9H2H9 487 aa15.32■□□□□ 0.04
EXOSC4-201ENST00000316052 POU2F3Q9UKI9 436 aa15.32■□□□□ 0.04
EXOSC4-201ENST00000316052 FLVCR1Q9Y5Y0 555 aa15.32■□□□□ 0.04
EXOSC4-201ENST00000316052 ZC3H12DA2A288 527 aaKnown RBP15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 A8MV72 311 aaPredicted RBP15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 BIRC5O15392 142 aa15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 CHRM4P08173 479 aa15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 LBPP18428 481 aa15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 S100A3P33764 101 aa15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 FABP6P51161 128 aa15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 UFM1P61960 85 aa15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 SLC25A3Q00325 362 aa15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 MPP2Q14168 576 aa15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 OR7E24Q6IFN5 339 aa15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 CASP12Q6UXS9 341 aa15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 FBXL14Q8N1E6 418 aa15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 TRNT1Q96Q11 434 aaKnown RBP15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 INPP5KQ9BT40 448 aa15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 REPIN1Q9BWE0 567 aaKnown RBP15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 AMBRA1Q9C0C7 1298 aa15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 SLC7A10Q9NS82 523 aa15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 PNPOQ9NVS9 261 aa15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 BTNL2Q9UIR0 455 aa15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 HAO1Q9UJM8 370 aa15.31■□□□□ 0.04
EXOSC4-201ENST00000316052 CCDC154A6NI56 674 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 AGAP5A6NIR3 686 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 E9PBE3 544 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 ZNF208O43345 1280 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 ALDOCP09972 364 aaKnown RBP15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 BGNP21810 368 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 TACR3P29371 465 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 IL12AP29459 219 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 CDKN2CP42773 168 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 HTR3AP46098 478 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 POLR2HP52434 150 aaKnown RBP15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 CLNS1AP54105 237 aaKnown RBP15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 SLC35A1P78382 337 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 HPCAP84074 193 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 SLC17A1Q14916 467 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 RAB35Q15286 201 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 COX20Q5RI15 118 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 TSPO2Q5TGU0 170 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 ZNF525Q8N782 197 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 ZIC4Q8N9L1 334 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 TNFRSF13CQ96RJ3 184 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 MEAF6Q9HAF1 191 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 SLC17A5Q9NRA2 495 aa15.3■□□□□ 0.04
EXOSC4-201ENST00000316052 NBEAL1Q6ZS30 2694 aa15.29■□□□□ 0.04
EXOSC4-201ENST00000316052 ELOA3DA6NLF2 546 aaPredicted RBP15.29■□□□□ 0.04
EXOSC4-201ENST00000316052 RNF212BA8MTL3 300 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms