RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 TRIM23P36406 574 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 ID1P41134 155 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 MAGEA12P43365 314 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 CCR4P51679 360 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 KPNA2P52292 529 aaKnown RBP3.43□□□□□ -1.86
SMCO3-201ENST00000316048 BST1Q10588 318 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 OVGP1Q12889 678 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 MEF2DQ14814 521 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 TAB1Q15750 504 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 MPPE1Q53F39 396 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 CGB2Q6NT52 195 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 RFWD3Q6PCD5 774 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 ZNF730Q6ZMV8 503 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 YRDCQ86U90 279 aaKnown RBP3.43□□□□□ -1.86
SMCO3-201ENST00000316048 RDH11Q8TC12 318 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 BRSK1Q8TDC3 778 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 LIPHQ8WWY8 451 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 PEX13Q92968 403 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 TADA1Q96BN2 335 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 CNRIP1Q96F85 164 aaPredicted RBP3.43□□□□□ -1.86
SMCO3-201ENST00000316048 PSKH2Q96QS6 385 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 EPYCQ99645 322 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 GPR22Q99680 433 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 PAPOLGQ9BWT3 736 aaKnown RBP3.43□□□□□ -1.86
SMCO3-201ENST00000316048 PDFQ9HBH1 243 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 NMRAL1Q9HBL8 299 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 FANCFQ9NPI8 374 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 SAR1AQ9NR31 198 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 TREX1Q9NSU2 369 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 SLC35D1Q9NTN3 355 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 STOML2Q9UJZ1 356 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 FBXO5Q9UKT4 447 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 TANC1Q9C0D5 1861 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 ZNF638Q14966 1978 aaKnown RBP3.43□□□□□ -1.86
SMCO3-201ENST00000316048 A0A087WW49 117 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 A0A0D9SEW6 157 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 A0A0U1RQV5 110 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 TMEM114B3SHH9 223 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 GOLGA8TH3BQL2 631 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 PEX11AO75192 247 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 SNNO75324 88 aaPredicted RBP3.43□□□□□ -1.86
SMCO3-201ENST00000316048 KRT36O76013 467 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 FGF19O95750 216 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 SERPINE1P05121 402 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 MYL2P10916 166 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 HOXB8P17481 243 aaPredicted RBP3.43□□□□□ -1.86
SMCO3-201ENST00000316048 GIFP27352 417 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 GABRR2P28476 465 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 HLA-FP30511 346 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 CHRNB4P30926 498 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 SLC1A6P48664 564 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 MTTPP55157 894 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 RAB10P61026 200 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 RPS24P62847 133 aaKnown RBP3.43□□□□□ -1.86
SMCO3-201ENST00000316048 GNB1P62873 340 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 HSPA14Q0VDF9 509 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 FAM189A2Q15884 450 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 CLPPQ16740 277 aaPredicted RBP3.43□□□□□ -1.86
SMCO3-201ENST00000316048 CES4AQ5XG92 561 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 FAM159AQ6UWV7 190 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 TMCO2Q7Z6W1 182 aaPredicted RBP3.43□□□□□ -1.86
SMCO3-201ENST00000316048 CUZD1Q86UP6 607 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 C10orf82Q8WW14 230 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 FCGR1BQ92637 280 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 DTNBP1Q96EV8 351 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 ATXN7L3BQ96GX2 97 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 RILPQ96NA2 401 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 UHRF2Q96PU4 802 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 CYP2S1Q96SQ9 504 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 NLNQ9BYT8 704 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 ZBP1Q9H171 429 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 ECT2Q9H8V3 914 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 SLC25A19Q9HC21 320 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 HPS4Q9NQG7 708 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 POLE3Q9NRF9 147 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 TMEM216Q9P0N5 145 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 ZMAT5Q9UDW3 170 aaKnown RBP3.43□□□□□ -1.86
SMCO3-201ENST00000316048 PPP1R3CQ9UQK1 317 aa3.43□□□□□ -1.86
SMCO3-201ENST00000316048 NUP205Q92621 2012 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 GREB1Q4ZG55 1949 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 SRCAPQ6ZRS2 3230 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 SHROOM3Q8TF72 1996 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 TRAV19A0A0A6YYK7 116 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 TBL1XO60907 577 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 KLHL2O95198 593 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 IGHEP01854 428 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 RBP1P09455 135 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 SLC26A3P40879 764 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 SLC1A2P43004 574 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 AQP5P55064 265 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 ABCE1P61221 599 aaKnown RBP3.42□□□□□ -1.86
SMCO3-201ENST00000316048 SSTP61278 116 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 RPL27P61353 136 aaKnown RBP3.42□□□□□ -1.86
SMCO3-201ENST00000316048 SLC7A9P82251 487 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 MYBPC1Q00872 1141 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 POU3F1Q03052 451 aaPredicted RBP3.42□□□□□ -1.86
SMCO3-201ENST00000316048 RAPSNQ13702 412 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 P2RY14Q15391 338 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 CYTH1Q15438 398 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 TAF1AQ15573 450 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms