RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 CEACAM19Q7Z692 300 aa10.85□□□□□ -0.67
LDLRAD3-201ENST00000315571 FAM24BQ8N5W8 94 aa10.85□□□□□ -0.67
LDLRAD3-201ENST00000315571 WDR89Q96FK6 387 aaPredicted RBP10.85□□□□□ -0.67
LDLRAD3-201ENST00000315571 MEX3AA1L020 520 aaKnown RBP10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 SEC14L5O43304 696 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 SMAD6O43541 496 aaKnown RBP10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 IGSF6O95976 241 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 SNRPBP14678 240 aaKnown RBP10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 DAOP14920 347 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 GLP1RP43220 463 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 ZFP36L2P47974 494 aaKnown RBP10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 AFF3P51826 1226 aaKnown RBP10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 C14orf28Q4W4Y0 310 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 BAIAP2L2Q6UXY1 529 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 OR52I1Q8NGK6 324 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 OR14K1Q8NGZ2 314 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 NPRL2Q8WTW4 380 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 MED8Q96G25 268 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 RBM18Q96H35 190 aaKnown RBP10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 RDH14Q9HBH5 336 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 ANGPT4Q9Y264 503 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 HS3ST2Q9Y278 367 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 MED16Q9Y2X0 877 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 MYOFQ9NZM1 2061 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 A0A1W2PPE3 182 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 C5orf52A6NGY3 159 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 CBY3A6NI87 242 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 LOC730098B7Z3J9 87 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 PRRT4C9JH25 899 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 PCDH8O95206 1070 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 HLA-DQB1P01920 261 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 GP1BAP07359 652 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 HCKP08631 526 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 SRFP11831 508 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 CPEP16870 476 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 HNF1AP20823 631 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 AHRP35869 848 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 MESP2Q0VG99 397 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 GAMTQ14353 236 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 UBXN2BQ14CS0 331 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 ATXN7L2Q5T6C5 722 aaPredicted RBP10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 C22orf39Q6P5X5 142 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 TSSK4Q6SA08 328 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 ARMC10Q8N2F6 343 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 ZNF511Q8NB15 262 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 OR2A12Q8NGT7 310 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 NFKBIDQ8NI38 313 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 NUBPLQ8TB37 319 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 LRFN5Q96NI6 719 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 METTL9Q9H1A3 318 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 EXO5Q9H790 373 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 FAM86C1Q9NVL1 165 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 ZNF223Q9UK11 482 aaPredicted RBP10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 ASB1Q9Y576 335 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 TRAPPC13A5PLN9 417 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 SLC25A12O75746 678 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 KCNK5O95279 499 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 CD160O95971 181 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 PCCBP05166 539 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 FAM157BP0CG42 384 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 IFNGR1P15260 489 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 DLSTP36957 453 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 ACTR1BP42025 376 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 SNRPD1P62314 119 aaKnown RBP10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 PPA1Q15181 289 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 OR6K2Q8NGY2 324 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 SENP5Q96HI0 755 aaPredicted RBP10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 SEC22AQ96IW7 307 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 ALG8Q9BVK2 526 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 FAIM2Q9BWQ8 316 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 AUNIPQ9H7T9 357 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 EPHA6Q9UF33 1036 aa10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 RUVBL1Q9Y265 456 aaKnown RBP10.84□□□□□ -0.67
LDLRAD3-201ENST00000315571 IQCF5A8MTL0 148 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 PPP1R2P9O14990 202 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 TRBC1P01850 177 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 AGTR1P30556 359 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 MPIP34949 423 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 MTNR1AP48039 350 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 CDH11P55287 796 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 MPPED2Q15777 294 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 DHRS7BQ6IAN0 325 aaPredicted RBP10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 MEX3DQ86XN8 651 aaKnown RBP10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 OR2G2Q8NGZ5 317 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 IMP4Q96G21 291 aaKnown RBP10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 NAA11Q9BSU3 229 aaPredicted RBP10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 SOX7Q9BT81 388 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 AARSD1Q9BTE6 412 aaKnown RBP10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 BPIFA1Q9NP55 256 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 ISYNA1Q9NPH2 558 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 LHX3Q9UBR4 397 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 PCDHB11Q9Y5F2 797 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 CXorf51AA0A1B0GTR3 108 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 INSIG1O15503 277 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 SOD1P00441 154 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 ADRA2AP08913 450 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 CTPS1P17812 591 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 RGRP47804 291 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 OR10A3P58181 314 aa10.83□□□□□ -0.68
LDLRAD3-201ENST00000315571 NKX6-1P78426 367 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms