RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 AKR1C4P17516 323 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 ART1P52961 327 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 ZNF404Q494X3 552 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 OR4N4Q8N0Y3 316 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 ASCC1Q8N9N2 400 aaKnown RBP12.53□□□□□ -0.4
RFFL-201ENST00000315249 OR5H2Q8NGV7 314 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 AKAP1Q92667 903 aaKnown RBP eCLIP12.53□□□□□ -0.48e-7■■■■□ 21.7
RFFL-201ENST00000315249 TXNDC15Q96J42 360 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 CHST8Q9H2A9 424 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 TESQ9UGI8 421 aaKnown RBP12.53□□□□□ -0.4
RFFL-201ENST00000315249 TMA7Q9Y2S6 64 aaKnown RBP12.53□□□□□ -0.4
RFFL-201ENST00000315249 RETP07949 1114 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 TACR1P25103 407 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 LSSP48449 732 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 GNMTQ14749 295 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 GPR139Q6DWJ6 353 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 OR7G1Q8NGA0 311 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 OR5W2Q8NH69 310 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 HSD17B8Q92506 261 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 KATNB1Q9BVA0 655 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 ABHD16AO95870 558 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 IL2RAP01589 272 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 EIF1P41567 113 aaKnown RBP12.53□□□□□ -0.4
RFFL-201ENST00000315249 PSMA6P60900 246 aaKnown RBP12.53□□□□□ -0.4
RFFL-201ENST00000315249 CNN3Q15417 329 aaKnown RBP12.53□□□□□ -0.4
RFFL-201ENST00000315249 YOD1Q5VVQ6 348 aaPredicted RBP12.53□□□□□ -0.4
RFFL-201ENST00000315249 OR7E24Q6IFN5 339 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 PGM2L1Q6PCE3 622 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 FAM83HQ6ZRV2 1179 aaPredicted RBP12.53□□□□□ -0.4
RFFL-201ENST00000315249 MKXQ8IYA7 352 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 OR1J2Q8NGS2 313 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 PCDHGA1Q9Y5H4 931 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 TRAPPC2LH3BP13 241 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 DSCR3O14972 297 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 HEXAP06865 529 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 ZDHHC11BP0C7U3 371 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 DCDC5Q6ZRR9 648 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 CSNK2A3Q8NEV1 391 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 SLC38A5Q8WUX1 472 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 C1QTNF2Q9BXJ5 285 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 TCEAL2Q9H3H9 227 aaPredicted RBP12.53□□□□□ -0.4
RFFL-201ENST00000315249 MAN2C1Q9NTJ4 1040 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 WNT11O96014 354 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 RAB3BP20337 219 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 DPY19L4Q7Z388 723 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 DCAF13Q9NV06 445 aaKnown RBP12.53□□□□□ -0.4
RFFL-201ENST00000315249 NPFFR2Q9Y5X5 522 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 RREB1Q92766 1687 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 SLC19A2O60779 497 aa12.52□□□□□ -0.4
RFFL-201ENST00000315249 ESCO2Q56NI9 601 aa12.52□□□□□ -0.4
RFFL-201ENST00000315249 MED18Q9BUE0 208 aa12.52□□□□□ -0.4
RFFL-201ENST00000315249 SYNPO2LQ9H987 977 aa12.52□□□□□ -0.4
RFFL-201ENST00000315249 KLF13Q9Y2Y9 288 aaPredicted RBP12.52□□□□□ -0.4
RFFL-201ENST00000315249 TAF1LQ8IZX4 1826 aa12.52□□□□□ -0.4
RFFL-201ENST00000315249 SERPINA2P20848 420 aa12.52□□□□□ -0.4
RFFL-201ENST00000315249 ERVK-16P61578 105 aa12.52□□□□□ -0.4
RFFL-201ENST00000315249 CNPY1Q3B7I2 92 aa12.52□□□□□ -0.4
RFFL-201ENST00000315249 OR8H3Q8N146 312 aa12.52□□□□□ -0.4
RFFL-201ENST00000315249 PAPD5Q8NDF8 572 aaKnown RBP12.52□□□□□ -0.4
RFFL-201ENST00000315249 SLC19A3Q9BZV2 496 aa12.52□□□□□ -0.4
RFFL-201ENST00000315249 ZGLP1P0C6A0 271 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 SLC48A1Q6P1K1 146 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 GOT1L1Q8NHS2 421 aaPredicted RBP12.52□□□□□ -0.41
RFFL-201ENST00000315249 TAAR9Q96RI9 348 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 WDR37Q9Y2I8 494 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 AK6Q9Y3D8 172 aaKnown RBP12.52□□□□□ -0.41
RFFL-201ENST00000315249 TMEM269A0A1B0GVZ9 245 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 ENSAO43768 121 aaKnown RBP12.52□□□□□ -0.41
RFFL-201ENST00000315249 CAPZBP47756 277 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 METAP1P53582 386 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 SLC37A3Q8NCC5 494 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 ZNF831Q5JPB2 1677 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 COL5A3P25940 1745 aaPredicted RBP12.52□□□□□ -0.41
RFFL-201ENST00000315249 PLPP1O14494 284 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 ETV5P41161 510 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 SBSNQ6UWP8 590 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 DDX31Q9H8H2 851 aaKnown RBP12.52□□□□□ -0.41
RFFL-201ENST00000315249 SLAMF8Q9P0V8 285 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 STUB1Q9UNE7 303 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 SLC5A10A0PJK1 596 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 ADARB1P78563 741 aaKnown RBP12.52□□□□□ -0.41
RFFL-201ENST00000315249 GGTA1PQ4G0N0 100 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 SLC35D2Q76EJ3 337 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 GPR148Q8TDV2 347 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 COQ10AQ96MF6 247 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 C1orf198Q9H425 327 aa12.52□□□□□ -0.41
RFFL-201ENST00000315249 RPL19P84098 196 aaKnown RBP12.51□□□□□ -0.41
RFFL-201ENST00000315249 TUBA3EQ6PEY2 450 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 CPEB2Q7Z5Q1 589 aaKnown RBP12.51□□□□□ -0.41
RFFL-201ENST00000315249 TOMM40LQ969M1 308 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 C4orf36Q96KX1 117 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 KIAA0513O60268 411 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 NUDT7P0C024 238 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 EPHA1P21709 976 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 UGT2B10P36537 528 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 AQP2P41181 271 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 BTG2P78543 158 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 ZNF322Q6U7Q0 402 aaPredicted RBP12.51□□□□□ -0.41
RFFL-201ENST00000315249 TMEM92Q6UXU6 159 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 TSPYL5Q86VY4 417 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms