RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 RORCP51449 518 aa11.4□□□□□ -0.58
RNF4-201ENST00000314289 SCN1BQ07699 218 aa11.4□□□□□ -0.58
RNF4-201ENST00000314289 CRMP1Q14194 572 aa11.4□□□□□ -0.58
RNF4-201ENST00000314289 SHBQ15464 509 aa11.4□□□□□ -0.58
RNF4-201ENST00000314289 C3orf38Q5JPI3 329 aa11.4□□□□□ -0.58
RNF4-201ENST00000314289 GARNL3Q5VVW2 1013 aa11.4□□□□□ -0.58
RNF4-201ENST00000314289 DNASE2BQ8WZ79 361 aa11.4□□□□□ -0.58
RNF4-201ENST00000314289 NDC1Q9BTX1 674 aa11.4□□□□□ -0.58
RNF4-201ENST00000314289 SRRQ9GZT4 340 aa11.4□□□□□ -0.58
RNF4-201ENST00000314289 C11orf54Q9H0W9 315 aaPredicted RBP11.4□□□□□ -0.58
RNF4-201ENST00000314289 ABCB9Q9NP78 766 aa11.4□□□□□ -0.58
RNF4-201ENST00000314289 TXNL4BQ9NX01 149 aaKnown RBP11.4□□□□□ -0.58
RNF4-201ENST00000314289 TNFRSF10DQ9UBN6 386 aa11.4□□□□□ -0.58
RNF4-201ENST00000314289 STUB1Q9UNE7 303 aa11.4□□□□□ -0.58
RNF4-201ENST00000314289 TRAPPC4Q9Y296 219 aa11.4□□□□□ -0.58
RNF4-201ENST00000314289 SERINC4A6NH21 518 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 C12orf71A8MTZ7 269 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 FAM25AB3EWG3 89 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 FAM25CB3EWG5 89 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 FAM25GB3EWG6 89 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 KHNYNO15037 678 aaKnown RBP11.39□□□□□ -0.59
RNF4-201ENST00000314289 NUDT21O43809 227 aaKnown RBP11.39□□□□□ -0.59
RNF4-201ENST00000314289 GLB1P16278 677 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 SLC37A1P57057 533 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 FGFBP1Q14512 234 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 CEP78Q5JTW2 689 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 ARHGAP40Q5TG30 622 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 ZNF613Q6PF04 617 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 GLCCI1Q86VQ1 547 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 PLXDC1Q8IUK5 500 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 SLC37A3Q8NCC5 494 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 SDR9C7Q8NEX9 313 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 OR10H4Q8NGA5 316 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 OR4K13Q8NH42 304 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 HOXB13Q92826 284 aaPredicted RBP11.39□□□□□ -0.59
RNF4-201ENST00000314289 RFKQ969G6 155 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 RNF170Q96K19 258 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 SLC22A4Q9H015 551 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.39□□□□□ -0.59
RNF4-201ENST00000314289 SSR3Q9UNL2 185 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 CMAHPQ9Y471 501 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 TMEM265A0A087WTH1 108 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 H0YIG0 161 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 GDF9O60383 454 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 PAICSP22234 425 aaKnown RBP11.39□□□□□ -0.59
RNF4-201ENST00000314289 SNRPD2P62316 118 aaKnown RBP11.39□□□□□ -0.59
RNF4-201ENST00000314289 PSPHP78330 225 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 FABP5Q01469 135 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 GUSBP11Q6P575 273 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 SLC2A12Q8TD20 617 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 BRIX1Q8TDN6 353 aaKnown RBP11.39□□□□□ -0.59
RNF4-201ENST00000314289 THAP3Q8WTV1 239 aaPredicted RBP11.39□□□□□ -0.59
RNF4-201ENST00000314289 DIRAS2Q96HU8 199 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 ELF4Q99607 663 aaPredicted RBP11.39□□□□□ -0.59
RNF4-201ENST00000314289 G6PC3Q9BUM1 346 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 CCDC86Q9H6F5 360 aaKnown RBP11.39□□□□□ -0.59
RNF4-201ENST00000314289 SLA2Q9H6Q3 261 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 BDP1A6H8Y1 2624 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 MED12Q93074 2177 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 FITM1A5D6W6 292 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 NPIPB9F8W1W9 429 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 WISP1O95388 367 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 SDC2P34741 201 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 HNRNPA0Q13151 305 aaKnown RBP11.39□□□□□ -0.59
RNF4-201ENST00000314289 PYDC2Q56P42 97 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 WDR45BQ5MNZ6 344 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 FAM69BQ5VUD6 431 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 TMPRSS11FQ6ZWK6 438 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 RNF113BQ8IZP6 322 aaKnown RBP11.39□□□□□ -0.59
RNF4-201ENST00000314289 OR5M3Q8NGP4 307 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 MAFAQ8NHW3 353 aaPredicted RBP11.39□□□□□ -0.59
RNF4-201ENST00000314289 SUN5Q8TC36 379 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 ERMAPQ96PL5 475 aaPredicted RBP11.39□□□□□ -0.59
RNF4-201ENST00000314289 NUDT9Q9BW91 350 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 SLC7A5P2Q9GIP4 190 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 MCCC2Q9HCC0 563 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 ZNF304Q9HCX3 659 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 FGF20Q9NP95 211 aaPredicted RBP11.39□□□□□ -0.59
RNF4-201ENST00000314289 KLHL1Q9NR64 748 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 SEC14L4Q9UDX3 406 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 MALT1Q9UDY8 824 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 EPHA6Q9UF33 1036 aa11.39□□□□□ -0.59
RNF4-201ENST00000314289 A0A0B4J293 547 aa11.38□□□□□ -0.59
RNF4-201ENST00000314289 C2orf92A0A1B0GVN3 265 aa11.38□□□□□ -0.59
RNF4-201ENST00000314289 MCIDASD6RGH6 385 aa11.38□□□□□ -0.59
RNF4-201ENST00000314289 NCR1O76036 304 aa11.38□□□□□ -0.59
RNF4-201ENST00000314289 HMGN1P05114 100 aa11.38□□□□□ -0.59
RNF4-201ENST00000314289 HTR1FP30939 366 aa11.38□□□□□ -0.59
RNF4-201ENST00000314289 NR0B1P51843 470 aaKnown RBP11.38□□□□□ -0.59
RNF4-201ENST00000314289 ZNF141Q15928 474 aa11.38□□□□□ -0.59
RNF4-201ENST00000314289 YIF1BQ5BJH7 314 aa11.38□□□□□ -0.59
RNF4-201ENST00000314289 PRPF38BQ5VTL8 546 aaKnown RBP11.38□□□□□ -0.59
RNF4-201ENST00000314289 NIPAL3Q6P499 406 aa11.38□□□□□ -0.59
RNF4-201ENST00000314289 RFLNBQ8N5W9 214 aa11.38□□□□□ -0.59
RNF4-201ENST00000314289 C10orf53Q8N6V4 93 aa11.38□□□□□ -0.59
RNF4-201ENST00000314289 SLC38A9Q8NBW4 561 aa11.38□□□□□ -0.59
RNF4-201ENST00000314289 TOR1AIP2Q8NFQ8 470 aa11.38□□□□□ -0.59
RNF4-201ENST00000314289 OR52E2Q8NGJ4 325 aa11.38□□□□□ -0.59
RNF4-201ENST00000314289 OR4C6Q8NH72 309 aa11.38□□□□□ -0.59
RNF4-201ENST00000314289 GRPEL2Q8TAA5 225 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms