RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 ADSLP30566 484 aaPredicted RBP10.72□□□□□ -0.69
SCFD1-201ENST00000311943 APOBEC1P41238 236 aaKnown RBP10.72□□□□□ -0.69
SCFD1-201ENST00000311943 RPS5P46782 204 aaKnown RBP10.72□□□□□ -0.69
SCFD1-201ENST00000311943 YAP1P46937 504 aaKnown RBP10.72□□□□□ -0.69
SCFD1-201ENST00000311943 KCNJ5P48544 419 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 POLR2HP52434 150 aaKnown RBP10.72□□□□□ -0.69
SCFD1-201ENST00000311943 OR2B6P58173 313 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 TXNL4AP83876 142 aaKnown RBP10.72□□□□□ -0.69
SCFD1-201ENST00000311943 CEACAM7Q14002 265 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 MAPRE2Q15555 327 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 OR7A5Q15622 319 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 FAM214BQ7L5A3 538 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 VTCN1Q7Z7D3 282 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 WDFY1Q8IWB7 410 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 DMRTC2Q8IXT2 367 aaPredicted RBP10.72□□□□□ -0.69
SCFD1-201ENST00000311943 TMEM99Q8N816 258 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 RBM24Q9BX46 236 aaKnown RBP10.72□□□□□ -0.69
SCFD1-201ENST00000311943 ADPRHL2Q9NX46 363 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 THUMPD1Q9NXG2 353 aaKnown RBP10.72□□□□□ -0.69
SCFD1-201ENST00000311943 ARL2BPQ9Y2Y0 163 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 NAV2Q8IVL1 2488 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 PRORSD1PA6NEY8 169 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 SYNGR4O95473 234 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 LGI1O95970 557 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 PLGP00747 810 aaPredicted RBP10.72□□□□□ -0.69
SCFD1-201ENST00000311943 COX6B1P14854 86 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 MAGEA8P43361 318 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 GSK3BP49841 420 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 CDH12P55289 794 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 RGS8P57771 180 aaPredicted RBP10.72□□□□□ -0.69
SCFD1-201ENST00000311943 LTBQ06643 244 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 LGALS3BPQ08380 585 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 GNA13Q14344 377 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 POU4F3Q15319 338 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 OR1Q1Q15612 314 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 COQ5Q5HYK3 327 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 DHRS4L2Q6PKH6 230 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 MEX3DQ86XN8 651 aaKnown RBP10.72□□□□□ -0.69
SCFD1-201ENST00000311943 FAM86B1Q8N7N1 296 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 PCYOX1LQ8NBM8 494 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 OR2T12Q8NG77 320 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 PTDSS2Q9BVG9 487 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 NSRP1Q9H0G5 558 aaKnown RBP10.72□□□□□ -0.69
SCFD1-201ENST00000311943 LIME1Q9H400 295 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 KLHL28Q9NXS3 571 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 MCTS1Q9ULC4 181 aaKnown RBP10.72□□□□□ -0.69
SCFD1-201ENST00000311943 CORO2BQ9UQ03 480 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 SYT5O00445 386 aa10.71□□□□□ -0.69
SCFD1-201ENST00000311943 LYPD3O95274 346 aa10.71□□□□□ -0.69
SCFD1-201ENST00000311943 OPRM1P35372 400 aa10.71□□□□□ -0.69
SCFD1-201ENST00000311943 EEFSECP57772 596 aaKnown RBP10.71□□□□□ -0.69
SCFD1-201ENST00000311943 RAC3P60763 192 aa10.71□□□□□ -0.69
SCFD1-201ENST00000311943 PSME3P61289 254 aa10.71□□□□□ -0.69
SCFD1-201ENST00000311943 PRAMEF8Q5VWM4 474 aa10.71□□□□□ -0.69
SCFD1-201ENST00000311943 PRAMEF7Q5VXH5 474 aa10.71□□□□□ -0.69
SCFD1-201ENST00000311943 WBP2NLQ6ICG8 309 aa10.71□□□□□ -0.69
SCFD1-201ENST00000311943 OR52E4Q8NGH9 312 aa10.71□□□□□ -0.69
SCFD1-201ENST00000311943 SLC25A36Q96CQ1 311 aa10.71□□□□□ -0.69
SCFD1-201ENST00000311943 ZC3HAV1LQ96H79 300 aaKnown RBP10.71□□□□□ -0.69
SCFD1-201ENST00000311943 REXO5Q96IC2 774 aaKnown RBP10.71□□□□□ -0.69
SCFD1-201ENST00000311943 ARHGDIGQ99819 225 aa10.71□□□□□ -0.69
SCFD1-201ENST00000311943 SFXN3Q9BWM7 321 aa10.71□□□□□ -0.69
SCFD1-201ENST00000311943 CHST11Q9NPF2 352 aa10.71□□□□□ -0.69
SCFD1-201ENST00000311943 SERINC1Q9NRX5 453 aa10.71□□□□□ -0.69
SCFD1-201ENST00000311943 RHCGQ9UBD6 479 aa10.71□□□□□ -0.69
SCFD1-201ENST00000311943 ZNF175Q9Y473 711 aa10.71□□□□□ -0.69
SCFD1-201ENST00000311943 A0A1W2PPR1 153 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 ZNF716A6NP11 495 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 J3KTA2 159 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 MAST4O15021 2626 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 SS18L1O75177 396 aaPredicted RBP10.7□□□□□ -0.7
SCFD1-201ENST00000311943 T-ENOLP0DO92 83 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 CXCR1P25024 350 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 ASCL1P50553 236 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 AKAP6Q13023 2319 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 SLC25A35Q3KQZ1 300 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 ENTPD8Q5MY95 495 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 ALKBH2Q6NS38 261 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 KRT73Q86Y46 540 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 MICU2Q8IYU8 434 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 RNASE6Q93091 150 aaKnown RBP10.7□□□□□ -0.7
SCFD1-201ENST00000311943 TAAR8Q969N4 342 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 CPNE4Q96A23 557 aaPredicted RBP10.7□□□□□ -0.7
SCFD1-201ENST00000311943 TPD52L3Q96J77 140 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 LRRC37BQ96QE4 947 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 ZNF607Q96SK3 696 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 MCHR1Q99705 422 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 EFCAB1Q9HAE3 211 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 GID8Q9NWU2 228 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 V9GYQ6 96 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 ELOVL7A1L3X0 281 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 FAM220BPB1ANY3 271 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 FAAHO00519 579 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 KPNA4O00629 521 aaPredicted RBP10.7□□□□□ -0.7
SCFD1-201ENST00000311943 SLC22A2O15244 555 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 SIAH2O43255 324 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 HNRNPRO43390 633 aaKnown RBP10.7□□□□□ -0.7
SCFD1-201ENST00000311943 NPIPB7O75200 414 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 FAM107AO95990 144 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 KDELR2P33947 212 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms