RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 GPC6Q9Y625 555 aaPredicted RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 LOC100130705A0A1B0GUX0 176 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 MEX3AA1L020 520 aaKnown RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 ZC3H12DA2A288 527 aaKnown RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 PRAMEF27A3QJZ7 478 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 A6NIN4 97 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 AGAP5A6NIR3 686 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 EIF3FO00303 357 aaPredicted RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 HMGN4O00479 90 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 EMC8O43402 210 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 CTNSO60931 367 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 NSA2O95478 260 aaKnown RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 KRT75O95678 551 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 GPANK1O95872 356 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 CCL3P10147 92 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 ACP2P11117 423 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 KLK2P20151 261 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 HTR3AP46098 478 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 KCNJ10P78508 379 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 GALEQ14376 348 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 ZNF846Q147U1 533 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 TSC22D1Q15714 1073 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 DECR1Q16698 335 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 ZNF181Q2M3W8 571 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 EIF2S3LQ2VIR3 472 aaKnown RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 TMEM176BQ3YBM2 270 aaPredicted RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 GGTA1PQ4G0N0 100 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 TMEM35AQ53FP2 167 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 PRR30Q53SZ7 412 aaPredicted RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 YIF1BQ5BJH7 314 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 DCST2Q5T1A1 773 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 NKAIN4Q8IVV8 208 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 BATF2Q8N1L9 274 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 DHRSXQ8N5I4 330 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 CNEP1R1Q8N9A8 125 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 PTPMT1Q8WUK0 201 aaPredicted RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 TESCQ96BS2 214 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 SCARF2Q96GP6 870 aaPredicted RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 FAM46AQ96IP4 442 aaKnown RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 OR5B2Q96R09 309 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 DPH1Q9BZG8 443 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 SEC61A2Q9H9S3 476 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 TBC1D23Q9NUY8 699 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 KLHL28Q9NXS3 571 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 CEP192Q8TEP8 1941 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 CPAMD8Q8IZJ3 1885 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 PFDN1O60925 122 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 CBX7O95931 251 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 F12P00748 615 aaPredicted RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 LDLRP01130 860 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 IGKV1D-16P01601 117 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 TPOP07202 933 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 HNRNPCP07910 306 aaKnown RBP eCLIP4.52□□□□□ -1.69
CAST-201ENST00000309190 BIKQ13323 160 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 RIN1Q13671 783 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 TBCEQ15813 527 aaPredicted RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 FAM98BQ52LJ0 330 aaKnown RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 SLC46A3Q7Z3Q1 461 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 OR9Q1Q8NGQ5 310 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 OR6K6Q8NGW6 343 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 SNRNP27Q8WVK2 155 aaKnown RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 SPSB2Q99619 263 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 IL1RAPQ9NPH3 570 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 TVP23BQ9NYZ1 205 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 A0A1W2PPK0 400 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 ZNF99A8MXY4 864 aaPredicted RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 SLC25A12O75746 678 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 PTTG1O95997 202 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 GPX2P18283 190 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 NAT1P18440 290 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 IL11P20809 199 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 ABCD3P28288 659 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 RORAP35398 523 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 NUDT1P36639 197 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 NRG3P56975 720 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 RAB38P57729 211 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 RNF4P78317 190 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 MAPK11Q15759 364 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 SSX1Q16384 188 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 SMN1Q16637 294 aaKnown RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 LAMTOR1Q6IAA8 161 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 SLC30A6Q6NXT4 461 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 ZNF585AQ6P3V2 769 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 VHLLQ6RSH7 139 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 LYPD4Q6UWN0 246 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 RABEPKQ7Z6M1 372 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 RANBP3LQ86VV4 465 aaPredicted RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 NRMQ8IXM6 262 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 FAM83FQ8NEG4 500 aaPredicted RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 OR6C4Q8NGE1 309 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 OR5P2Q8WZ92 322 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 NSMAFQ92636 917 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 RPL3LQ92901 407 aaKnown RBP4.52□□□□□ -1.69
CAST-201ENST00000309190 SLC41A2Q96JW4 573 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 TAAR9Q96RI9 348 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 REEP1Q9H902 201 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 ZNF226Q9NYT6 803 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 PSORS1C1Q9UIG5 152 aa4.52□□□□□ -1.69
CAST-201ENST00000309190 FBXL2Q9UKC9 423 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms