RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ADAD1Q96M93 576 aaKnown RBP13.48□□□□□ -0.25
PTPN9-201ENST00000306726 GAL3ST4Q96RP7 486 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 SURF4O15260 269 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 ATP5A1P25705 553 aaKnown RBP13.48□□□□□ -0.25
PTPN9-201ENST00000306726 MAOBP27338 520 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 CDK3Q00526 305 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 FOXK2Q01167 660 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 TAF13Q15543 124 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 C1orf94Q6P1W5 598 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 SLC35D2Q76EJ3 337 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 OR2L2Q8NH16 312 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 CXorf58Q96LI9 332 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 HS6ST2Q96MM7 605 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 PIGUQ9H490 435 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 C14orf105Q9NVL8 296 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 CCSO14618 274 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 SLC19A2O60779 497 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 PIPP12273 146 aaPredicted RBP13.47□□□□□ -0.25
PTPN9-201ENST00000306726 NUP62P37198 522 aaPredicted RBP13.47□□□□□ -0.25
PTPN9-201ENST00000306726 ALG10BQ5I7T1 473 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 TANGO2Q6ICL3 276 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 MEPCEQ7L2J0 689 aaKnown RBP13.47□□□□□ -0.25
PTPN9-201ENST00000306726 UBE3DQ7Z6J8 389 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 KIAA0907Q7Z7F0 614 aaPredicted RBP13.47□□□□□ -0.25
PTPN9-201ENST00000306726 COMMD2Q86X83 199 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 OR6N2Q8NGY6 317 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 ELP4Q96EB1 424 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 RANBP3Q9H6Z4 567 aaPredicted RBP13.47□□□□□ -0.25
PTPN9-201ENST00000306726 UBE2QL1A1L167 161 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 EPPINO95925 133 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 RAF1P04049 648 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 SLC35G6P0C7Q6 338 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 PCSK2P16519 638 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 RGS1Q08116 209 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 PON3Q15166 354 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 CLPPQ16740 277 aaPredicted RBP13.47□□□□□ -0.25
PTPN9-201ENST00000306726 HEPHL1Q6MZM0 1159 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 CREB3L2Q70SY1 520 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 KCTD9Q7L273 389 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 LRRC28Q86X40 367 aaPredicted RBP13.47□□□□□ -0.25
PTPN9-201ENST00000306726 MORN4Q8NDC4 146 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 HSD17B8Q92506 261 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.47□□□□□ -0.25
PTPN9-201ENST00000306726 DPEP2Q9H4A9 486 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 TMEM185BQ9H7F4 350 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 NOX3Q9HBY0 568 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 MCCC2Q9HCC0 563 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 C1QTNF3-AMACRE9PGA6 284 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 GPR171O14626 319 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 OPN1LWP04000 364 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 VAMP1P23763 118 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 P2RY2P41231 377 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 STAT5AP42229 794 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 GUCA2AQ02747 115 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 OPCMLQ14982 345 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 LGALSLQ3ZCW2 172 aaPredicted RBP13.47□□□□□ -0.25
PTPN9-201ENST00000306726 HBMQ6B0K9 141 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 PTCRAQ6ISU1 281 aaPredicted RBP13.47□□□□□ -0.25
PTPN9-201ENST00000306726 SYNPRQ8TBG9 265 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 APOBEC3BQ9UH17 382 aaKnown RBP13.47□□□□□ -0.25
PTPN9-201ENST00000306726 AP1M2Q9Y6Q5 423 aa13.47□□□□□ -0.25
PTPN9-201ENST00000306726 TRAV18A0A075B6X5 111 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 C13orf42A0A1B0GVH6 325 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 SGK494L7N484 410 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 GTF2F2P13984 249 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 HLA-DMAP28067 261 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 CDK5Q00535 292 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 PRDX1Q06830 199 aaKnown RBP13.46□□□□□ -0.25
PTPN9-201ENST00000306726 B3GNTL1Q67FW5 361 aaPredicted RBP13.46□□□□□ -0.25
PTPN9-201ENST00000306726 TMEM88Q6PEY1 159 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 GALNTL5Q7Z4T8 443 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 MS4A15Q8N5U1 240 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 OR4K14Q8NGD5 310 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 OR56A1Q8NGH5 318 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 OR1F2PQ96R84 312 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 PTDSS2Q9BVG9 487 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 EXO5Q9H790 373 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 PHPT1Q9NRX4 125 aaPredicted RBP13.46□□□□□ -0.25
PTPN9-201ENST00000306726 KCNN3Q9UGI6 736 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 PFDN2Q9UHV9 154 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 A0A1B0GV50 99 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 TMEM129A0AVI4 362 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 TMEM72A0PK05 275 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 ITGB7P26010 798 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 PDE7AQ13946 482 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 PCGF3Q3KNV8 242 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 OR10K2Q6IF99 312 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 ZNF836Q6ZNA1 936 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 ZNF620Q6ZNG0 422 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 LIX1LQ8IVB5 337 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 POGLUT1Q8NBL1 392 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 OR5M1Q8NGP8 315 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 MAFAQ8NHW3 353 aaPredicted RBP13.46□□□□□ -0.25
PTPN9-201ENST00000306726 DUSP19Q8WTR2 217 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 FAM46BQ96A09 425 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 CHFRQ96EP1 664 aa13.46□□□□□ -0.25
PTPN9-201ENST00000306726 TESQ9UGI8 421 aaKnown RBP13.46□□□□□ -0.25
PTPN9-201ENST00000306726 ZNF443Q9Y2A4 671 aaPredicted RBP13.46□□□□□ -0.25
PTPN9-201ENST00000306726 A0A0G2JPF8 293 aa13.46□□□□□ -0.26
PTPN9-201ENST00000306726 A0A1W2PQU0 124 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms