RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 SLC1A3P43003 542 aa20.16■□□□□ 0.82
TPM4-201ENST00000300933 C3orf38Q5JPI3 329 aa20.16■□□□□ 0.82
TPM4-201ENST00000300933 ZNF57Q68EA5 555 aaPredicted RBP20.16■□□□□ 0.82
TPM4-201ENST00000300933 PCNPQ8WW12 178 aaKnown RBP20.16■□□□□ 0.82
TPM4-201ENST00000300933 PHF21AQ96BD5 680 aa20.16■□□□□ 0.82
TPM4-201ENST00000300933 AHCYL2Q96HN2 611 aaKnown RBP20.16■□□□□ 0.82
TPM4-201ENST00000300933 TNFRSF13CQ96RJ3 184 aa20.16■□□□□ 0.82
TPM4-201ENST00000300933 ISG20L2Q9H9L3 353 aaKnown RBP20.16■□□□□ 0.82
TPM4-201ENST00000300933 PLCL2Q9UPR0 1127 aa20.16■□□□□ 0.82
TPM4-201ENST00000300933 MRPS33Q9Y291 106 aaKnown RBP20.16■□□□□ 0.82
TPM4-201ENST00000300933 CDK2AP1O14519 115 aa20.16■□□□□ 0.82
TPM4-201ENST00000300933 CASKO14936 926 aa20.16■□□□□ 0.82
TPM4-201ENST00000300933 BMP7P18075 431 aa20.16■□□□□ 0.82
TPM4-201ENST00000300933 NOS3P29474 1203 aa20.16■□□□□ 0.82
TPM4-201ENST00000300933 GPR3P46089 330 aa20.16■□□□□ 0.82
TPM4-201ENST00000300933 ALG10BQ5I7T1 473 aa20.16■□□□□ 0.82
TPM4-201ENST00000300933 IDO2Q6ZQW0 420 aa20.16■□□□□ 0.82
TPM4-201ENST00000300933 OR8H3Q8N146 312 aa20.16■□□□□ 0.82
TPM4-201ENST00000300933 LRRC17Q8N6Y2 441 aa20.16■□□□□ 0.82
TPM4-201ENST00000300933 TMED9Q9BVK6 235 aa20.16■□□□□ 0.82
TPM4-201ENST00000300933 TBC1D17Q9HA65 648 aa20.16■□□□□ 0.82
TPM4-201ENST00000300933 MED31Q9Y3C7 131 aa20.16■□□□□ 0.82
TPM4-201ENST00000300933 ASCC3Q8N3C0 2202 aaKnown RBP20.16■□□□□ 0.82
TPM4-201ENST00000300933 DVL2O14641 736 aa20.15■□□□□ 0.82
TPM4-201ENST00000300933 NSA2O95478 260 aaKnown RBP20.15■□□□□ 0.82
TPM4-201ENST00000300933 PXDC1Q5TGL8 231 aa20.15■□□□□ 0.82
TPM4-201ENST00000300933 DTX3Q8N9I9 347 aa20.15■□□□□ 0.82
TPM4-201ENST00000300933 TSLPQ969D9 159 aa20.15■□□□□ 0.82
TPM4-201ENST00000300933 RELTQ969Z4 430 aa20.15■□□□□ 0.82
TPM4-201ENST00000300933 DNAJA3Q96EY1 480 aa20.15■□□□□ 0.82
TPM4-201ENST00000300933 TTTY10Q9BZA0 68 aa20.15■□□□□ 0.82
TPM4-201ENST00000300933 MPDZO75970 2070 aa20.15■□□□□ 0.82
TPM4-201ENST00000300933 SOX1O00570 391 aaPredicted RBP20.15■□□□□ 0.82
TPM4-201ENST00000300933 M6PRP20645 277 aa20.15■□□□□ 0.82
TPM4-201ENST00000300933 AP2S1P53680 142 aaPredicted RBP20.15■□□□□ 0.82
TPM4-201ENST00000300933 RPS7P62081 194 aaKnown RBP20.15■□□□□ 0.82
TPM4-201ENST00000300933 CFHR1Q03591 330 aa20.15■□□□□ 0.82
TPM4-201ENST00000300933 TMEM151BQ8IW70 566 aa20.15■□□□□ 0.82
TPM4-201ENST00000300933 FGF20Q9NP95 211 aaPredicted RBP20.15■□□□□ 0.82
TPM4-201ENST00000300933 TMEM150CB9EJG8 249 aa20.14■□□□□ 0.82
TPM4-201ENST00000300933 LMO7DNF2Z398 122 aa20.14■□□□□ 0.82
TPM4-201ENST00000300933 BHLHE40O14503 412 aa20.14■□□□□ 0.82
TPM4-201ENST00000300933 FABP7O15540 132 aa20.14■□□□□ 0.82
TPM4-201ENST00000300933 CPEP16870 476 aa20.14■□□□□ 0.82
TPM4-201ENST00000300933 CELP19835 753 aa20.14■□□□□ 0.82
TPM4-201ENST00000300933 HNRNPKP61978 463 aaKnown RBP eCLIP20.14■□□□□ 0.82
TPM4-201ENST00000300933 CRYZQ08257 329 aaKnown RBP20.14■□□□□ 0.82
TPM4-201ENST00000300933 TSSK4Q6SA08 328 aa20.14■□□□□ 0.82
TPM4-201ENST00000300933 KIRREL2Q6UWL6 708 aa20.14■□□□□ 0.82
TPM4-201ENST00000300933 Q7L0L9 218 aa20.14■□□□□ 0.82
TPM4-201ENST00000300933 BMP8AQ7Z5Y6 402 aa20.14■□□□□ 0.82
TPM4-201ENST00000300933 IQCF2Q8IXL9 164 aa20.14■□□□□ 0.82
TPM4-201ENST00000300933 ZNF595Q8IYB9 648 aa20.14■□□□□ 0.82
TPM4-201ENST00000300933 AP3S1Q92572 193 aa20.14■□□□□ 0.82
TPM4-201ENST00000300933 PTP4A1Q93096 173 aa20.14■□□□□ 0.82
TPM4-201ENST00000300933 PPIL3Q9H2H8 161 aaKnown RBP20.14■□□□□ 0.82
TPM4-201ENST00000300933 PPP1R3EQ9H7J1 279 aa20.14■□□□□ 0.82
TPM4-201ENST00000300933 SIGLEC7Q9Y286 467 aa20.14■□□□□ 0.82
TPM4-201ENST00000300933 CDC14CA4D256 554 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 SNTNA6NMZ2 147 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 C17orf51A8MQB3 221 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 SHOXO15266 292 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 ORC5O43913 435 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 PPP1R3DO95685 299 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 CTBP2P56545 445 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 CLDN20P56880 219 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 NXPH1P58417 271 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 FABP5Q01469 135 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 FAM205BPQ63HN1 556 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 PRR22Q8IZ63 422 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 BCORP1Q8N888 145 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 DUSP18Q8NEJ0 188 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 OR52L1Q8NGH7 329 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 LRRC20Q8TCA0 184 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 SPRYD4Q8WW59 207 aaPredicted RBP20.14■□□□□ 0.81
TPM4-201ENST00000300933 LMF2Q9BU23 707 aaKnown RBP20.14■□□□□ 0.81
TPM4-201ENST00000300933 TEX12Q9BXU0 123 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 OR8D2Q9GZM6 311 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 NRSN2Q9GZP1 204 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.14■□□□□ 0.813e-9■■■□□ 17.9
TPM4-201ENST00000300933 GLTPQ9NZD2 209 aa20.14■□□□□ 0.81
TPM4-201ENST00000300933 A0A0B4J2E0 115 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 A0A1B0GX12 115 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 C17orf105B2RV13 164 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 INMT-MINDY4F8WBC2 141 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 HCN1O60741 890 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 C14orf28Q4W4Y0 310 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 C1orf189Q5VU69 101 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 OAFQ86UD1 273 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 KLBQ86Z14 1044 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 CDK20Q8IZL9 346 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 C9orf62Q8N4C0 152 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 OR51L1Q8NGJ5 315 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 C1orf216Q8TAB5 229 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 KLHDC3Q9BQ90 382 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.13■□□□□ 0.81
TPM4-201ENST00000300933 Q9N2J8 555 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 DIABLOQ9NR28 239 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 TLCD2A6NGC4 264 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 AK1P00568 194 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms