RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 SHEQ5VZ18 495 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 GPRIN1Q7Z2K8 1008 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 SORCS2Q96PQ0 1159 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 EXO1Q9UQ84 846 aaKnown RBP13.91□□□□□ -0.18
SCN3B-201ENST00000299333 GPR45Q9Y5Y3 372 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 A0A0U1RQF3 1178 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 IMPA1P29218 277 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 RAB28P51157 221 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 ACSM1Q08AH1 577 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 CAMK2DQ13557 499 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 CBLL1Q75N03 491 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 DIO2Q92813 273 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 C20orf85Q9H1P6 137 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 INPP5EQ9NRR6 644 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 SLC39A9Q9NUM3 307 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 CDHR4A6H8M9 788 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 ACOD1A6NK06 481 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 ZIC2O95409 532 aaPredicted RBP13.9□□□□□ -0.18
SCN3B-201ENST00000299333 POLR2IP36954 125 aaKnown RBP13.9□□□□□ -0.18
SCN3B-201ENST00000299333 BPHLQ86WA6 291 aaPredicted RBP13.9□□□□□ -0.18
SCN3B-201ENST00000299333 MTMR14Q8NCE2 650 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 C1orf123Q9NWV4 160 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 MED16Q9Y2X0 877 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 OR6C76A6NM76 312 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 SLC10A3P09131 477 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 NME1P15531 152 aaKnown RBP13.9□□□□□ -0.18
SCN3B-201ENST00000299333 PTTG1IPP53801 180 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 GPLD1P80108 840 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 LRRC26Q2I0M4 334 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 C4orf17Q53FE4 359 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 ATPAF1Q5TC12 328 aaPredicted RBP13.9□□□□□ -0.18
SCN3B-201ENST00000299333 HBMQ6B0K9 141 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 SLC12A9Q9BXP2 914 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 PPP1R14DQ9NXH3 145 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 MON2Q7Z3U7 1717 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 B4DXG7 233 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 PTGER1P34995 402 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 EFNA3P52797 238 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 SRYQ05066 204 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 AAK1Q2M2I8 961 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 OR13C9Q8NGT0 318 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 SLAMF8Q9P0V8 285 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 FER1L4A9Z1Z3 1794 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 ANTXRLA6NF34 631 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 GRXCR2A6NFK2 248 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 METTL15A6NJ78 407 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 PIRO00625 290 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 LATO43561 262 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 VEGFDO43915 354 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 NSA2O95478 260 aaKnown RBP13.9□□□□□ -0.18
SCN3B-201ENST00000299333 TAS2R46P59540 309 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 MFGE8Q08431 387 aaPredicted RBP13.9□□□□□ -0.18
SCN3B-201ENST00000299333 MRPL21Q7Z2W9 205 aaKnown RBP13.9□□□□□ -0.18
SCN3B-201ENST00000299333 LIX1LQ8IVB5 337 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 HSD17B11Q8NBQ5 300 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 SEC22CQ9BRL7 303 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 HOXD1Q9GZZ0 328 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 XYLT2Q9H1B5 865 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 OLAHQ9NV23 265 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 ZNF281Q9Y2X9 895 aa13.9□□□□□ -0.18
SCN3B-201ENST00000299333 ARNTLO00327 626 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 LAP3P28838 519 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 PCSK6P29122 969 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 SFTPDP35247 375 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 TSFMP43897 325 aaKnown RBP13.89□□□□□ -0.19
SCN3B-201ENST00000299333 INHBCP55103 352 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 UBE2NP61088 152 aaKnown RBP13.89□□□□□ -0.19
SCN3B-201ENST00000299333 PLK5Q496M5 336 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 MCOLN1Q9GZU1 580 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 SIDT1Q9NXL6 827 aaKnown RBP13.89□□□□□ -0.19
SCN3B-201ENST00000299333 INSL5Q9Y5Q6 135 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 POM121BA6NF01 834 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 K7ERQ8 282 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 PPP6CO00743 305 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 XCR1P46094 333 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 GIPRP48546 466 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 DAPP51397 102 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 FYTTD1Q96QD9 318 aaKnown RBP13.89□□□□□ -0.19
SCN3B-201ENST00000299333 SH3BGRL2Q9UJC5 107 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 EMCNQ9ULC0 261 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 USP22Q9UPT9 525 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 GABRR3A8MPY1 467 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 SEC14L6B5MCN3 397 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 TCAPO15273 167 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 SHC1P29353 583 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 HMGCLP35914 325 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 PCP4P48539 62 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 SLC10A1Q14973 349 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 SFXN4Q6P4A7 337 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 LILRA2Q8N149 483 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 CD200R1Q8TD46 325 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 KLHDC7BQ96G42 594 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 PDE7BQ9NP56 450 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 PRAMEF27A3QJZ7 478 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 SCG5P05408 212 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 ADRB1P08588 477 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 PRAMEF9Q5VWM5 478 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 ADIPOR2Q86V24 386 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 TMEM217Q8N7C4 229 aa13.89□□□□□ -0.19
SCN3B-201ENST00000299333 OR2T11Q8NH01 316 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms