RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 ACOD1A6NK06 481 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 NPIPA7E9PJI5 369 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 PEX12O00623 359 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 FBXO24O75426 580 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 PMS2P2O95744 297 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 NPIPA8P0DM63 369 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 SEMA3BQ13214 749 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 KIR2DS3Q14952 304 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 ADGRF3Q8IZF5 1079 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 FOXJ1Q92949 421 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 NEURL3Q96EH8 262 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 CAPNS2Q96L46 248 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 PIGMQ9H3S5 423 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 TUBG2Q9NRH3 451 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 SDHAF2Q9NX18 166 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 LHX3Q9UBR4 397 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 CLEC2DQ9UHP7 191 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 ZNF225Q9UK10 706 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 ONECUT3O60422 494 aaPredicted RBP10.29□□□□□ -0.76
PBRM1-201ENST00000296302 ZNF780AO75290 641 aaPredicted RBP10.29□□□□□ -0.76
PBRM1-201ENST00000296302 HOXB5P09067 269 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 FPR3P25089 353 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 HOXC13P31276 330 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 KCNJ10P78508 379 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 FLI1Q01543 452 aaPredicted RBP10.29□□□□□ -0.76
PBRM1-201ENST00000296302 CHRNEQ04844 493 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 TNK1Q13470 666 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 BATFQ16520 125 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 TMEM164Q5U3C3 297 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 OR13C2Q8NGS9 318 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 ST7LQ8TDW4 575 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 TBC1D20Q96BZ9 403 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 NMNAT2Q9BZQ4 307 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 ELOVL3Q9HB03 270 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 ZNF223Q9UK11 482 aaPredicted RBP10.29□□□□□ -0.76
PBRM1-201ENST00000296302 CA5BQ9Y2D0 317 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 I6L893 689 aaPredicted RBP10.29□□□□□ -0.76
PBRM1-201ENST00000296302 GIPP09681 153 aaPredicted RBP10.29□□□□□ -0.76
PBRM1-201ENST00000296302 RAC2P15153 192 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 ITGB7P26010 798 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 CCR6P51684 374 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 KIAA1024LP59773 190 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 UBE2KP61086 200 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 WBP2NLQ6ICG8 309 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 LIPIQ6XZB0 460 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 SLC25A21Q9BQT8 299 aaPredicted RBP10.29□□□□□ -0.76
PBRM1-201ENST00000296302 GABARAPL3Q9BY60 117 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 ZNF160Q9HCG1 818 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 FBXO7Q9Y3I1 522 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 CORINQ9Y5Q5 1042 aa10.29□□□□□ -0.76
PBRM1-201ENST00000296302 A0A0B4J2A0 478 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 A0A1B0GTW7 788 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 ZNF865P0CJ78 1059 aaPredicted RBP10.28□□□□□ -0.76
PBRM1-201ENST00000296302 HTR3AP46098 478 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 CDK3Q00526 305 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 SPOCK1Q08629 439 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 RAB31Q13636 194 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 GPR176Q14439 515 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 LPCAT3Q6P1A2 487 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 SH2D5Q6ZV89 423 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 TRAPPC6BQ86SZ2 158 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 TCEAL8Q8IYN2 117 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 UBE2FQ969M7 185 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 SLAMF9Q96A28 289 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 SMIM14Q96QK8 99 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 SHPKQ9UHJ6 478 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 TIMM8BQ9Y5J9 83 aaPredicted RBP10.28□□□□□ -0.76
PBRM1-201ENST00000296302 A8MVJ9 347 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 SURF4O15260 269 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 SHOXO15266 292 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 BRINP1O60477 761 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 KLF8O95600 359 aaPredicted RBP10.28□□□□□ -0.76
PBRM1-201ENST00000296302 PXDC1Q5TGL8 231 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 PRAMEF8Q5VWM4 474 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 PRAMEF7Q5VXH5 474 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 B3GLCTQ6Y288 498 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 MEX3BQ6ZN04 569 aaKnown RBP10.28□□□□□ -0.76
PBRM1-201ENST00000296302 TMUB2Q71RG4 321 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 SLC43A2Q8N370 569 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 PGBD5Q8N414 524 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 CPNE7Q9UBL6 633 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 TMEM269A0A1B0GVZ9 245 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 FTCDNL1E5RQL4 147 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 RAF1P04049 648 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 SLC10A3P09131 477 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 SLC14A1Q13336 389 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 RAET1LQ5VY80 246 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 STEAP1BQ6NZ63 245 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 SLCO4C1Q6ZQN7 724 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 AMIGO3Q86WK7 504 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 TMEM151BQ8IW70 566 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 OLIG1Q8TAK6 271 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 YIPF6Q96EC8 236 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 LRRC46Q96FV0 321 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 SFXN2Q96NB2 322 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 TMEM43Q9BTV4 400 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 ACKR4Q9NPB9 350 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 SIDT1Q9NXL6 827 aaKnown RBP10.28□□□□□ -0.76
PBRM1-201ENST00000296302 TCRBV5S2A0A599 114 aa10.28□□□□□ -0.76
PBRM1-201ENST00000296302 CD300LBA8K4G0 201 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms