RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 PRR22Q8IZ63 422 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 ACBD7Q8N6N7 88 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 SLC37A3Q8NCC5 494 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 OR52N1Q8NH53 320 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 NUBPLQ8TB37 319 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 JAM3Q9BX67 310 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 NUAK2Q9H093 628 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 MCCC2Q9HCC0 563 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 ERVK13-1Q9NX77 482 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 NXT1Q9UKK6 140 aaKnown RBP8.36□□□□□ -1.07
PDPN-201ENST00000294489 ZNF337Q9Y3M9 751 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 PEX16Q9Y5Y5 336 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 ZNF670-ZNF695F2Z2N8 137 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 HEXBP07686 556 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 ZNF28P17035 718 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 SLC6A8P48029 635 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 PNLIPRP2P54317 469 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 TUBA3EQ6PEY2 450 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 FAM198BQ6UWH4 519 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 MFSD4AQ8N468 514 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 ZNF563Q8TA94 476 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 RHBDD1Q8TEB9 315 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 TM9SF4Q92544 642 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 C1GALT1C1Q96EU7 318 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 ERMAPQ96PL5 475 aaPredicted RBP8.36□□□□□ -1.07
PDPN-201ENST00000294489 NRSN2Q9GZP1 204 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 OR51V1Q9H2C8 321 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 MED20Q9H944 212 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 R4GN57 208 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 hCG_2014768A0A024R1R8 64 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.35□□□□□ -1.07
PDPN-201ENST00000294489 CDC14CA4D256 554 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 ICOSLGO75144 302 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 RPL4P36578 427 aaKnown RBP8.35□□□□□ -1.07
PDPN-201ENST00000294489 FAAH2Q6GMR7 532 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 APOOLQ6UXV4 268 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 SHISA6Q6ZSJ9 500 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 NAXDQ8IW45 347 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 PTP4A1Q93096 173 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 TEAD3Q99594 435 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 LAT2Q9GZY6 243 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 CRNNQ9UBG3 495 aaPredicted RBP8.35□□□□□ -1.07
PDPN-201ENST00000294489 PNMA8CA0A1B0GUJ8 204 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 TMEM200CA6NKL6 621 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 TAF4O00268 1085 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 CCL4P13236 92 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 GABRA5P31644 462 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 RORCP51449 518 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 PPP5CP53041 499 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 EMP2P54851 167 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 PRPS1P60891 318 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 RNF4P78317 190 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 RUNX1T1Q06455 604 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 ACSM1Q08AH1 577 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 CRMP1Q14194 572 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 CBLN3Q6UW01 205 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 CPEB2Q7Z5Q1 589 aaKnown RBP8.35□□□□□ -1.07
PDPN-201ENST00000294489 LSRQ86X29 649 aaPredicted RBP8.35□□□□□ -1.07
PDPN-201ENST00000294489 SIRT6Q8N6T7 355 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 METTL21AQ8WXB1 218 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 TMEM203Q969S6 136 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 TMEM43Q9BTV4 400 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 TBL1XR1Q9BZK7 514 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 SPRY4Q9C004 299 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 INPP5EQ9NRR6 644 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 KLHL21Q9UJP4 597 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 GSTK1Q9Y2Q3 226 aa8.35□□□□□ -1.07
PDPN-201ENST00000294489 CAB39Q9Y376 341 aaPredicted RBP8.35□□□□□ -1.07
PDPN-201ENST00000294489 DAPL1A0PJW8 107 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 C12orf71A8MTZ7 269 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 ALG1L2C9J202 215 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 AGRPO00253 132 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 PLD2O14939 933 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 HCRTR2O43614 444 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 NDUFB5O43674 189 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 GDF9O60383 454 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 FADS1O60427 444 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 OR7A10O76100 309 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 CD40LGP29965 261 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 FHL1Q13642 323 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 FCRLBQ6BAA4 426 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 B3GLCTQ6Y288 498 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 DPY19L2P2Q6ZN68 376 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 NUP54Q7Z3B4 507 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 BTLAQ7Z6A9 289 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 ATG4DQ86TL0 474 aaPredicted RBP8.34□□□□□ -1.07
PDPN-201ENST00000294489 C10orf53Q8N6V4 93 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 CYB561A3Q8NBI2 242 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 FAM98AQ8NCA5 519 aaKnown RBP8.34□□□□□ -1.07
PDPN-201ENST00000294489 ZNF485Q8NCK3 441 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 OR5M3Q8NGP4 307 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 OMA1Q96E52 524 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 KCTD7Q96MP8 289 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 HCAR1Q9BXC0 346 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 C12orf10Q9HB07 376 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 TXNL4BQ9NX01 149 aaKnown RBP8.34□□□□□ -1.07
PDPN-201ENST00000294489 TOR4AQ9NXH8 423 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 ZDBF2Q9HCK1 2354 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 OR6C70A6NIJ9 312 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 J3QRE1 110 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms