RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 BCKDHBP21953 392 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 GABRA5P31644 462 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 CENPFP49454 3210 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 OPCMLQ14982 345 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 CLEC14AQ86T13 490 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 GKN2Q86XP6 184 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 FNDC9Q8TBE3 224 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 ARL5BQ96KC2 179 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 WDR92Q96MX6 357 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 DDX31Q9H8H2 851 aaKnown RBP11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 IL26Q9NPH9 171 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 HEMK1Q9Y5R4 338 aaPredicted RBP11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 A0A1B0GV50 99 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 NPIPA2E9PIF3 369 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 NPIPA3F8WFD2 350 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 ARHGAP33O14559 1287 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 GMDSO60547 372 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 RDH16O75452 317 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 PDGFAP04085 211 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 KLK3P07288 261 aaPredicted RBP11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 IFNGR1P15260 489 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 ACPPP15309 386 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 CAV2P51636 162 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 AKR1C2P52895 323 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 TAS2R20P59543 309 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 SYT6Q5T7P8 510 aaPredicted RBP11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 SYNPRQ8TBG9 265 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 GIMAP5Q96F15 307 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 ZNF419Q96HQ0 510 aaPredicted RBP11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 OR1A2Q9Y585 309 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 ANAPC1Q9H1A4 1944 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 VSTM5A8MXK1 200 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 SLC16A6O15403 523 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 SCO2O43819 266 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 FUCA1P04066 466 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 CCNOP22674 350 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 MAOBP27338 520 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 POU3F4P49335 361 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 TAS2R19P59542 299 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 IL13RA1P78552 427 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 MAP4K2Q12851 820 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 FAM83HQ6ZRV2 1179 aaPredicted RBP11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 CSNK1A1LQ8N752 337 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 OR51L1Q8NGJ5 315 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 FOXRED1Q96CU9 486 aaPredicted RBP11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 PITX2Q99697 317 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 METTL17Q9H7H0 456 aaPredicted RBP11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 UGT2A1Q9Y4X1 527 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 LSM5Q9Y4Y9 91 aaKnown RBP11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 GREB1Q4ZG55 1949 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 FEZF1A0PJY2 475 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 MT-ND4P03905 459 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 PROS1P07225 676 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 PSMB1P20618 241 aaKnown RBP11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 CXADRP78310 365 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 FAPQ12884 760 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 PGGHGQ32M88 737 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 AGBL4Q5VU57 503 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 CRTC1Q6UUV9 634 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 OR14A2Q96R54 314 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 CPPED1Q9BRF8 314 aaPredicted RBP11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 EVA1AQ9H8M9 152 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 SEMA4GQ9NTN9 838 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 DKKL1Q9UK85 242 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 SLC7A7Q9UM01 511 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 PPP6CO00743 305 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 AGPAT2O15120 278 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 SYT7O43581 403 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 NHLH1Q02575 133 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 NNATQ16517 81 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 P4HA3Q7Z4N8 544 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 PDLIM5Q96HC4 596 aaKnown RBP11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 IL21RQ9HBE5 538 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 DMRT3Q9NQL9 472 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 RCE1Q9Y256 329 aa11.03□□□□□ -0.64
SYNGAP1-201ENST00000293748 A0A1W2PS29 197 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 TXNL1O43396 289 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 IGLV3-19P01714 112 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 ARSBP15848 533 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 CHATP28329 748 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 RAB5CP51148 216 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 SIM1P81133 766 aaPredicted RBP11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 DMWDQ09019 674 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 ELOCQ15369 112 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 C3orf38Q5JPI3 329 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 PIP5KL1Q5T9C9 394 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 SLC22A25Q6T423 547 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 PTRH1Q86Y79 214 aaKnown RBP11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 CDHR4A6H8M9 788 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 TRIM64A6NGJ6 449 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 OR6C65A6NJZ3 312 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 FBXO45P0C2W1 286 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 PNMTP11086 282 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 CRABP1P29762 137 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 TLE3Q04726 772 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 PIANPQ8IYJ0 282 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 HRASLS5Q96KN8 279 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 ZNF583Q96ND8 569 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 FANCFQ9NPI8 374 aa11.02□□□□□ -0.64
SYNGAP1-201ENST00000293748 METTL15A6NJ78 407 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms