RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 Q7L0L9 218 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 LRRC25Q8N386 305 aaPredicted RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 SPICQ8N5J4 248 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 EIF4E3Q8N5X7 224 aaKnown RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 TMEM99Q8N816 258 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 CLRN3Q8NCR9 226 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 OR5T2Q8NGG2 359 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 SP7Q8TDD2 431 aaPredicted RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 PHYHIPQ92561 330 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 KLK6Q92876 244 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 SCARF2Q96GP6 870 aaPredicted RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 PGLYRP3Q96LB9 341 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 CD180Q99467 661 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 TTYH1Q9H313 450 aaPredicted RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 WDR26Q9H7D7 661 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 IFT22Q9H7X7 185 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 NPDC1Q9NQX5 325 aaPredicted RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 POLE3Q9NRF9 147 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 C14orf105Q9NVL8 296 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 APOBEC3BQ9UH17 382 aaKnown RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 GMEB2Q9UKD1 530 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 LAMA5O15230 3695 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 A0A0G2JN53 185 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 A0A1B0GUH1 482 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 DAPL1A0PJW8 107 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 FAM86C2PA6NEL3 165 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 GLOD5A6NK44 160 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 ABCD4O14678 606 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 OGG1O15527 345 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 FRS3O43559 492 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 CH25HO95992 272 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 SERPINA3P01011 423 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 WNT1P04628 370 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 PCCBP05166 539 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 DBIP07108 87 aaKnown RBP9.58□□□□□ -0.88
SKA1-201ENST00000285116 SMIM10L1P0DMW3 83 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 CMPK1P30085 196 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 PEBP1P30086 187 aaKnown RBP9.58□□□□□ -0.88
SKA1-201ENST00000285116 TNFRSF17Q02223 184 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 MESP2Q0VG99 397 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 ZNF750Q32MQ0 723 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 FHL5Q5TD97 284 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 PM20D2Q8IYS1 436 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 KCT2Q8NC54 265 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 FAM98AQ8NCA5 519 aaKnown RBP9.58□□□□□ -0.88
SKA1-201ENST00000285116 OR51G2Q8NGK0 314 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 COQ8AQ8NI60 647 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 ABHD4Q8TB40 342 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 RSPRY1Q96DX4 576 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 SMIM10Q96HG1 83 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 FCRL4Q96PJ5 515 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 IFT27Q9BW83 186 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 CHIAQ9BZP6 476 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 SLC6A17Q9H1V8 727 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 PLEKHA1Q9HB21 404 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 SCPEP1Q9HB40 452 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 PRSS16Q9NQE7 514 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 NKIRAS2Q9NYR9 191 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 THAP10Q9P2Z0 257 aaPredicted RBP9.58□□□□□ -0.88
SKA1-201ENST00000285116 ZMIZ1Q9ULJ6 1067 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 CAMK2AQ9UQM7 478 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 SLC17A4Q9Y2C5 497 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 SLC35A3Q9Y2D2 325 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 MRPS7Q9Y2R9 242 aaKnown RBP9.58□□□□□ -0.88
SKA1-201ENST00000285116 HEBP2Q9Y5Z4 205 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 NUP210LQ5VU65 1888 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 A0A087WV62 115 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 MCRIP1C9JLW8 97 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 LGALS8O00214 317 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 FCMRO60667 390 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 AK1P00568 194 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 DRD3P35462 400 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 RAP2BP61225 183 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 RPS15AP62244 130 aaKnown RBP9.58□□□□□ -0.88
SKA1-201ENST00000285116 GGTLC2Q14390 218 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 ETFDHQ16134 617 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 AGBL4Q5VU57 503 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 PLBD1Q6P4A8 553 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 Q6ZTK2 550 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 PAQR7Q86WK9 346 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 NAXDQ8IW45 347 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 ZNF619Q8N2I2 560 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 STPG2Q8N412 459 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 OR52E1Q8NGJ3 308 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 OR51Q1Q8NH59 317 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 HOXB13Q92826 284 aaPredicted RBP9.58□□□□□ -0.88
SKA1-201ENST00000285116 ZNF707Q96C28 371 aaPredicted RBP9.58□□□□□ -0.88
SKA1-201ENST00000285116 STACQ99469 402 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 NPAS1Q99742 590 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 UQCC2Q9BRT2 126 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 ADGRL4Q9HBW9 690 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 IL23AQ9NPF7 189 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 NANSQ9NR45 359 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 PIPOXQ9P0Z9 390 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 MGAT4CQ9UBM8 478 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 WDR45Q9Y484 360 aa9.58□□□□□ -0.88
SKA1-201ENST00000285116 TBC1D3EA0A087X179 549 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 IGLON5A6NGN9 336 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 PTP4A3O75365 173 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 RP2O75695 350 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms