RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SCPEP1Q9HB40 452 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 FAM86C1Q9NVL1 165 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 FBXL2Q9UKC9 423 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 SIX6O95475 246 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 KLHDC9Q8NEP7 349 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 NLGN4YQ8NFZ3 816 aaPredicted RBP15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 FNDC9Q8TBE3 224 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 MARC2Q969Z3 335 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 CD300CQ08708 224 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 MALLQ13021 153 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 ARL6IP1Q15041 203 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 COX20Q5RI15 118 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 ZBTB37Q5TC79 503 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 SBSNQ6UWP8 590 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 ZNF679Q8IYX0 411 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 STEAP2Q8NFT2 490 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 OR1M1Q8NGA1 313 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 ST7LQ8TDW4 575 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 ADAMTS18Q8TE60 1221 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 INPP5EQ9NRR6 644 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 VSX1Q9NZR4 365 aaPredicted RBP15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 ADAM10O14672 748 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 RGS13O14921 159 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 MSX1P28360 303 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 CTHP32929 405 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 RAB4BP61018 213 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 HMGN3Q15651 99 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 CTU2Q2VPK5 515 aaKnown RBP15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 OR7E24Q6IFN5 339 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 TGIF2Q9GZN2 237 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 NXF5Q9H1B4 397 aaKnown RBP15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 PIGMQ9H3S5 423 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 KNL1Q8NG31 2342 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 TUBAL3A6NHL2 446 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 LCATP04180 440 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 PRLHRP49683 370 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 HNRNPKP61978 463 aaKnown RBP eCLIP15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 MRPL49Q13405 166 aaKnown RBP15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 SLC22A6Q4U2R8 563 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 HBMQ6B0K9 141 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 GAREM2Q75VX8 874 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 OR4Q3Q8NH05 313 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 ISG20Q96AZ6 181 aaKnown RBP15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 LPAR4Q99677 370 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 NELFAQ9H3P2 528 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 SNX11Q9Y5W9 270 aa15.36■□□□□ 0.05
SH3RF1-201ENST00000284637 CIB4A0PJX0 185 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 UBL4AP11441 157 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 ITGB7P26010 798 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 GDNFP39905 211 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 ETV5P41161 510 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 CLDN2P57739 230 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 CDK3Q00526 305 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 TNFRSF17Q02223 184 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 EXOSC2Q13868 293 aaKnown RBP15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 ARHGAP19Q14CB8 494 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 KANSL1Q7Z3B3 1105 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 ZNF695Q8IW36 515 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 CLRN3Q8NCR9 226 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 FOXRED1Q96CU9 486 aaPredicted RBP15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 ZNF582Q96NG8 517 aaPredicted RBP15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 SFXN1Q9H9B4 322 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 TSPAN11A1L157 253 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 C1SP09871 688 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 SLC6A19Q695T7 634 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 BPIFB2Q8N4F0 458 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 ADOQ96SZ5 270 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 SPNS1Q9H2V7 528 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 ZFP57Q9NU63 452 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 HHLA2Q9UM44 414 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 CSO75390 466 aaKnown RBP15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 F13BP05160 661 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 PVRP15151 417 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 BTLAQ7Z6A9 289 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 GLB1L2Q8IW92 636 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 ZNF740Q8NDX6 193 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 DOK1Q99704 481 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 ZNF160Q9HCG1 818 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 CLEC2DQ9UHP7 191 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 UBL3O95164 117 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 HOXB5P09067 269 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 OR8G3PP0DMU2 310 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 CTSAP10619 480 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 PDZK1IP1Q13113 114 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 MEF2DQ14814 521 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 HNRNPA1L2Q32P51 320 aaKnown RBP15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 SLC2A12Q8TD20 617 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 HAVCR2Q8TDQ0 301 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 GHSRQ92847 366 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 APOOQ9BUR5 198 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 HCSTQ9UBK5 93 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 ATG4BQ9Y4P1 393 aa15.35■□□□□ 0.05
SH3RF1-201ENST00000284637 COL2A1P02458 1487 aaPredicted RBP15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 D6RAR5 112 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 CYBAP13498 195 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 IMPA1P29218 277 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 KCNJ10P78508 379 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 SLC14A2Q15849 920 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 C3orf38Q5JPI3 329 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 MRPL2Q5T653 305 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms