RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 TUSC2O75896 110 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 HPNP05981 417 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 APOOLQ6UXV4 268 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 NLGN4YQ8NFZ3 816 aaPredicted RBP8.19□□□□□ -1.1
NIPBL-201ENST00000282516 LILRB4Q8NHJ6 448 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 MRPL38Q96DV4 380 aaKnown RBP8.19□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF582Q96NG8 517 aaPredicted RBP8.19□□□□□ -1.1
NIPBL-201ENST00000282516 TMPRSS5Q9H3S3 457 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 BOKQ9UMX3 212 aaPredicted RBP8.19□□□□□ -1.1
NIPBL-201ENST00000282516 SCN3AQ9NY46 2000 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 H3BMQ9 156 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 HOXB5P09067 269 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 DBHP09172 617 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 RANP62826 216 aaKnown RBP8.19□□□□□ -1.1
NIPBL-201ENST00000282516 LCTLQ6UWM7 567 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 FZD8Q9H461 694 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 RYDENQ9NUL5 291 aaKnown RBP8.19□□□□□ -1.1
NIPBL-201ENST00000282516 SRPK3Q9UPE1 567 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF281Q9Y2X9 895 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 GRASPQ7Z6J2 395 aaPredicted RBP8.19□□□□□ -1.1
NIPBL-201ENST00000282516 SIMC1Q8NDZ2 872 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 IMP4Q96G21 291 aaKnown RBP8.19□□□□□ -1.1
NIPBL-201ENST00000282516 CAPNS2Q96L46 248 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 KCMF1Q9P0J7 381 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 FBXL4Q9UKA2 621 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 GAB2Q9UQC2 676 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 POM121CA8CG34 1229 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 OR8U8P0C7N1 319 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 M6PRP20645 277 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 SSTR2P30874 369 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 TAGLN2P37802 199 aaKnown RBP8.19□□□□□ -1.1
NIPBL-201ENST00000282516 RAB13P51153 203 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 CHRNEQ04844 493 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 OR8B8Q15620 311 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 FCRLBQ6BAA4 426 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 OR10K1Q8NGX5 313 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 KCTD12Q96CX2 325 aaKnown RBP8.19□□□□□ -1.1
NIPBL-201ENST00000282516 KCNJ15Q99712 375 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 SIX2Q9NPC8 291 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 POMT1Q9Y6A1 747 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 ROBO1Q9Y6N7 1651 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 BCL9LQ86UU0 1499 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 KRBA1A5PL33 1030 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 MEIS3P1A6NDR6 274 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 CA12O43570 354 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 RAD1O60671 282 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 SNHG28P0DPA3 235 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF133P52736 654 aaPredicted RBP8.19□□□□□ -1.1
NIPBL-201ENST00000282516 HPSE2Q8WWQ2 592 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 NSUN5Q96P11 429 aaKnown RBP8.19□□□□□ -1.1
NIPBL-201ENST00000282516 TMEM43Q9BTV4 400 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 SGPP1Q9BX95 441 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF395Q9H8N7 513 aaPredicted RBP8.19□□□□□ -1.1
NIPBL-201ENST00000282516 CACNG4Q9UBN1 327 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 FAM96BQ9Y3D0 163 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 XKRY2A2RUG3 117 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 NCBP2LA6PVI3 153 aaKnown RBP8.19□□□□□ -1.1
NIPBL-201ENST00000282516 C17orf105B2RV13 164 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 MTHFD2P13995 350 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 ETV4P43268 484 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 SSX7Q7RTT5 188 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 PRR22Q8IZ63 422 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 NMNAT1Q9HAN9 279 aaPredicted RBP8.19□□□□□ -1.1
NIPBL-201ENST00000282516 RASD1Q9Y272 281 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 ETV7Q9Y603 341 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 RNASET2O00584 256 aaKnown RBP8.19□□□□□ -1.1
NIPBL-201ENST00000282516 SBK2P0C263 348 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 GKP32189 559 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 INCA1Q0VD86 236 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF718Q3SXZ3 478 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 KIRREL1Q96J84 757 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 VN1R3Q9BXE9 311 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 NXF5Q9H1B4 397 aaKnown RBP8.19□□□□□ -1.1
NIPBL-201ENST00000282516 CNOT2Q9NZN8 540 aaKnown RBP8.19□□□□□ -1.1
NIPBL-201ENST00000282516 IGLON5A6NGN9 336 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 LAMTOR5O43504 91 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 CACNG3O60359 315 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 HOXD12P35452 270 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 BAMBIQ13145 260 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 SERPINA11Q86U17 422 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 NDFIP1Q9BT67 221 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 CRB3Q9BUF7 120 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 TM7SF3Q9NS93 570 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 ADAMTS6Q9UKP5 1117 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 PSAT1Q9Y617 370 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF207O43670 478 aaKnown RBP8.18□□□□□ -1.1
NIPBL-201ENST00000282516 CYTIPO60759 359 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 S1PR4O95977 384 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 IGHEP01854 428 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 IL1RNP18510 177 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 RPS5P46782 204 aaKnown RBP8.18□□□□□ -1.1
NIPBL-201ENST00000282516 OR7A5Q15622 319 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 TCTE3Q8IZS6 198 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 ARSGQ96EG1 525 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 SMG9Q9H0W8 520 aaKnown RBP8.18□□□□□ -1.1
NIPBL-201ENST00000282516 ZDHHC7Q9NXF8 308 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 MCRIP1C9JLW8 97 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 TOX4O94842 621 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 GSTP1P09211 210 aaKnown RBP8.18□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF728P0DKX0 622 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms