RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 IL12BP29460 328 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 KRT20P35900 424 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 IDH2P48735 452 aaKnown RBP22.35■■□□□ 1.17
SSBP4-201ENST00000270061 TDGF1P3P51864 188 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 RASSF6Q6ZTQ3 369 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 FAM98AQ8NCA5 519 aaKnown RBP22.35■■□□□ 1.17
SSBP4-201ENST00000270061 MPP4Q96JB8 637 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 ADOQ96SZ5 270 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 DUSP21Q9H596 190 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 RASSF1Q9NS23 344 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 PLCXD1Q9NUJ7 323 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 SCN3BQ9NY72 215 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 FLRT3Q9NZU0 649 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 YARS2Q9Y2Z4 477 aaKnown RBP22.35■■□□□ 1.17
SSBP4-201ENST00000270061 GTF3C1Q12789 2109 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 POU1F1P28069 291 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 ABCD3P28288 659 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 FOXB2Q5VYV0 432 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 C12orf73Q69YU5 71 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 NRMQ8IXM6 262 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 SSC4DQ8WTU2 575 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 TMEM239Q8WW34 195 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 OMA1Q96E52 524 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 IMPAD1Q9NX62 359 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 MYOTQ9UBF9 498 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 A0A1B0GWA3 101 aa22.34■■□□□ 1.17
SSBP4-201ENST00000270061 A0A1W2PQD3 144 aa22.34■■□□□ 1.17
SSBP4-201ENST00000270061 H3BN98 237 aa22.34■■□□□ 1.17
SSBP4-201ENST00000270061 SOX14O95416 240 aa22.34■■□□□ 1.17
SSBP4-201ENST00000270061 FMO3P31513 532 aa22.34■■□□□ 1.17
SSBP4-201ENST00000270061 SSR4P51571 173 aa22.34■■□□□ 1.17
SSBP4-201ENST00000270061 PLCXD2Q0VAA5 305 aa22.34■■□□□ 1.17
SSBP4-201ENST00000270061 TMEM236Q5W0B7 351 aa22.34■■□□□ 1.17
SSBP4-201ENST00000270061 WDR88Q6ZMY6 472 aa22.34■■□□□ 1.17
SSBP4-201ENST00000270061 ZNF227Q86WZ6 799 aa22.34■■□□□ 1.17
SSBP4-201ENST00000270061 CYP4Z2PQ8N1L4 340 aa22.34■■□□□ 1.17
SSBP4-201ENST00000270061 POGLUT1Q8NBL1 392 aa22.34■■□□□ 1.17
SSBP4-201ENST00000270061 TRUB1Q8WWH5 349 aaKnown RBP22.34■■□□□ 1.17
SSBP4-201ENST00000270061 ZNF426Q9BUY5 554 aa22.34■■□□□ 1.17
SSBP4-201ENST00000270061 LIN28AQ9H9Z2 209 aaKnown RBP22.34■■□□□ 1.17
SSBP4-201ENST00000270061 AASSQ9UDR5 926 aa22.34■■□□□ 1.17
SSBP4-201ENST00000270061 TMEM200CA6NKL6 621 aa22.33■■□□□ 1.17
SSBP4-201ENST00000270061 NME2P1O60361 137 aa22.33■■□□□ 1.17
SSBP4-201ENST00000270061 MRPS14O60783 128 aaKnown RBP22.33■■□□□ 1.17
SSBP4-201ENST00000270061 NTN1O95631 604 aa22.33■■□□□ 1.17
SSBP4-201ENST00000270061 ENDOUP21128 410 aaKnown RBP22.33■■□□□ 1.17
SSBP4-201ENST00000270061 NME2P22392 152 aa22.33■■□□□ 1.17
SSBP4-201ENST00000270061 RBM34P42696 430 aaKnown RBP22.33■■□□□ 1.17
SSBP4-201ENST00000270061 CDK5Q00535 292 aa22.33■■□□□ 1.17
SSBP4-201ENST00000270061 ULK3Q6PHR2 472 aa22.33■■□□□ 1.17
SSBP4-201ENST00000270061 LINC00114Q6XXX2 140 aa22.33■■□□□ 1.17
SSBP4-201ENST00000270061 P3H2Q8IVL5 708 aa22.33■■□□□ 1.17
SSBP4-201ENST00000270061 PRR22Q8IZ63 422 aa22.33■■□□□ 1.17
SSBP4-201ENST00000270061 FAM46AQ96IP4 442 aaKnown RBP22.33■■□□□ 1.17
SSBP4-201ENST00000270061 ERRFI1Q9UJM3 462 aaPredicted RBP22.33■■□□□ 1.17
SSBP4-201ENST00000270061 OSGIN2Q9Y236 505 aa22.33■■□□□ 1.17
SSBP4-201ENST00000270061 SLC5A6Q9Y289 635 aa22.33■■□□□ 1.17
SSBP4-201ENST00000270061 XPNPEP2O43895 674 aa22.33■■□□□ 1.16
SSBP4-201ENST00000270061 ICOSLGO75144 302 aa22.33■■□□□ 1.16
SSBP4-201ENST00000270061 OR2J2O76002 312 aa22.33■■□□□ 1.16
SSBP4-201ENST00000270061 OR6B1O95007 311 aa22.33■■□□□ 1.16
SSBP4-201ENST00000270061 IGFBP1P08833 259 aaPredicted RBP22.33■■□□□ 1.16
SSBP4-201ENST00000270061 UBL4AP11441 157 aa22.33■■□□□ 1.16
SSBP4-201ENST00000270061 MST1P26927 711 aa22.33■■□□□ 1.16
SSBP4-201ENST00000270061 NRG3P56975 720 aa22.33■■□□□ 1.16
SSBP4-201ENST00000270061 SLC35A2P78381 396 aa22.33■■□□□ 1.16
SSBP4-201ENST00000270061 PRKCDQ05655 676 aa22.33■■□□□ 1.16
SSBP4-201ENST00000270061 GFRALQ6UXV0 394 aa22.33■■□□□ 1.16
SSBP4-201ENST00000270061 APOOLQ6UXV4 268 aa22.33■■□□□ 1.16
SSBP4-201ENST00000270061 C16orf47Q6ZP98 133 aaPredicted RBP22.33■■□□□ 1.16
SSBP4-201ENST00000270061 KIF18BQ86Y91 864 aa22.33■■□□□ 1.16
SSBP4-201ENST00000270061 OR5L2Q8NGL0 311 aa22.33■■□□□ 1.16
SSBP4-201ENST00000270061 SLC25A19Q9HC21 320 aa22.33■■□□□ 1.16
SSBP4-201ENST00000270061 OR6C70A6NIJ9 312 aa22.32■■□□□ 1.16
SSBP4-201ENST00000270061 GIPRP48546 466 aa22.32■■□□□ 1.16
SSBP4-201ENST00000270061 SNRPGP62308 76 aaKnown RBP22.32■■□□□ 1.16
SSBP4-201ENST00000270061 SKP2Q13309 424 aa22.32■■□□□ 1.16
SSBP4-201ENST00000270061 CD226Q15762 336 aa22.32■■□□□ 1.16
SSBP4-201ENST00000270061 PNPLA5Q7Z6Z6 429 aaPredicted RBP22.32■■□□□ 1.16
SSBP4-201ENST00000270061 CCDC103Q8IW40 242 aa22.32■■□□□ 1.16
SSBP4-201ENST00000270061 CLDN22Q8N7P3 220 aa22.32■■□□□ 1.16
SSBP4-201ENST00000270061 DNAJA4Q8WW22 397 aaPredicted RBP22.32■■□□□ 1.16
SSBP4-201ENST00000270061 IPCEF1Q8WWN9 437 aaPredicted RBP22.32■■□□□ 1.16
SSBP4-201ENST00000270061 FRMD6Q96NE9 622 aa22.32■■□□□ 1.16
SSBP4-201ENST00000270061 CCNB1IP1Q9NPC3 277 aa22.32■■□□□ 1.16
SSBP4-201ENST00000270061 PAK1IP1Q9NWT1 392 aaPredicted RBP22.32■■□□□ 1.16
SSBP4-201ENST00000270061 CNIH4Q9P003 139 aa22.32■■□□□ 1.16
SSBP4-201ENST00000270061 TMEM5Q9Y2B1 443 aa22.32■■□□□ 1.16
SSBP4-201ENST00000270061 ALG1L2C9J202 215 aa22.31■■□□□ 1.16
SSBP4-201ENST00000270061 WWP2O00308 870 aa22.31■■□□□ 1.16
SSBP4-201ENST00000270061 ZNF264O43296 627 aa22.31■■□□□ 1.16
SSBP4-201ENST00000270061 PIP5K1CO60331 668 aa22.31■■□□□ 1.16
SSBP4-201ENST00000270061 HTR1AP08908 422 aa22.31■■□□□ 1.16
SSBP4-201ENST00000270061 JUNBP17275 347 aaPredicted RBP22.31■■□□□ 1.16
SSBP4-201ENST00000270061 CTBP2P56545 445 aa22.31■■□□□ 1.16
SSBP4-201ENST00000270061 SMN1Q16637 294 aaKnown RBP22.31■■□□□ 1.16
SSBP4-201ENST00000270061 SPARTQ8N0X7 666 aa22.31■■□□□ 1.16
SSBP4-201ENST00000270061 PHOSPHO1Q8TCT1 267 aa22.31■■□□□ 1.16
SSBP4-201ENST00000270061 ASB15Q8WXK1 588 aa22.31■■□□□ 1.16
SSBP4-201ENST00000270061 PSMG3-AS1Q96PY0 264 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms