RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 ACAD8Q9UKU7 415 aa16.81■□□□□ 0.28
COL5A3-201ENST00000264828 HHLA2Q9UM44 414 aa16.81■□□□□ 0.28
COL5A3-201ENST00000264828 C2orf72A6NCS6 295 aa16.81■□□□□ 0.28
COL5A3-201ENST00000264828 IDUAP35475 653 aa16.81■□□□□ 0.28
COL5A3-201ENST00000264828 VEGFCP49767 419 aa16.81■□□□□ 0.28
COL5A3-201ENST00000264828 EEF1A2Q05639 463 aaKnown RBP16.81■□□□□ 0.28
COL5A3-201ENST00000264828 ZNF578Q96N58 590 aaPredicted RBP16.81■□□□□ 0.28
COL5A3-201ENST00000264828 SUCNR1Q9BXA5 334 aa16.81■□□□□ 0.28
COL5A3-201ENST00000264828 TRBV11-1A0A0K0K1C0 115 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 CLN5O75503 358 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 OMGP23515 440 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 GDF1P27539 372 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 ARFGAP1Q8N6T3 406 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 ELF4Q99607 663 aaPredicted RBP16.8■□□□□ 0.28
COL5A3-201ENST00000264828 BTBD2Q9BX70 525 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 ZDHHC7Q9NXF8 308 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 SLC6A14Q9UN76 642 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 VASPP50552 380 aaPredicted RBP16.8■□□□□ 0.28
COL5A3-201ENST00000264828 TMEM201Q5SNT2 666 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 HSD17B8Q92506 261 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 PUS1Q9Y606 427 aaKnown RBP eCLIP16.8■□□□□ 0.28
COL5A3-201ENST00000264828 HBQ1P09105 142 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 CPOXP36551 454 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 TREX1Q9NSU2 369 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.8■□□□□ 0.28
COL5A3-201ENST00000264828 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.8■□□□□ 0.28
COL5A3-201ENST00000264828 ACOD1A6NK06 481 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 ARNTLO00327 626 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 YIF1BQ5BJH7 314 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 SLC6A19Q695T7 634 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 NRARPQ7Z6K4 114 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 MAP3K3Q99759 626 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 HCAR1Q9BXC0 346 aa16.8■□□□□ 0.28
COL5A3-201ENST00000264828 GMPR2Q9P2T1 348 aaKnown RBP16.8■□□□□ 0.28
COL5A3-201ENST00000264828 C17orf113A0A1B0GUU1 675 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 NXPH3O95157 252 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 GCAP28676 217 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 GABRA2P47869 451 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 IRF4Q15306 451 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 AARDQ4LEZ3 155 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 OR5H6Q8NGV6 325 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 TERB2Q8NHR7 220 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 OR2M2Q96R28 347 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 PTRH2Q9Y3E5 179 aaKnown RBP16.79■□□□□ 0.28
COL5A3-201ENST00000264828 TIAM2Q8IVF5 1701 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 M0QZQ0 153 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 GM2AP17900 193 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 PAN3Q58A45 887 aaKnown RBP16.79■□□□□ 0.28
COL5A3-201ENST00000264828 DPPA4Q7L190 304 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 LILRB4Q8NHJ6 448 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 TNFRSF10AO00220 468 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 IL1AP01583 271 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 UBE2KP61086 200 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 HBA1P69905 142 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 HTRA3P83110 453 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 TMPRSS7Q7RTY8 843 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 SEC22AQ96IW7 307 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 USB1Q9BQ65 265 aaKnown RBP16.79■□□□□ 0.28
COL5A3-201ENST00000264828 DHRS4Q9BTZ2 278 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 MAN2B1O00754 1011 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 BET1O15155 118 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 DAPP51397 102 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 POU3F1Q03052 451 aaPredicted RBP16.79■□□□□ 0.28
COL5A3-201ENST00000264828 ZNF91Q05481 1191 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 EBPQ15125 230 aaKnown RBP16.79■□□□□ 0.28
COL5A3-201ENST00000264828 MSI2Q96DH6 328 aaKnown RBP16.79■□□□□ 0.28
COL5A3-201ENST00000264828 LUZP4Q9P127 313 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 C1orf105O95561 183 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 CEBPBP17676 345 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 MRPS34P82930 218 aaKnown RBP16.79■□□□□ 0.28
COL5A3-201ENST00000264828 TBCEQ15813 527 aaPredicted RBP16.79■□□□□ 0.28
COL5A3-201ENST00000264828 SLC35F3Q8IY50 421 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 C8orf33Q9H7E9 229 aaPredicted RBP16.79■□□□□ 0.28
COL5A3-201ENST00000264828 ZNF281Q9Y2X9 895 aa16.79■□□□□ 0.28
COL5A3-201ENST00000264828 OR7A17O14581 309 aa16.78■□□□□ 0.28
COL5A3-201ENST00000264828 PXNP49023 591 aaPredicted RBP16.78■□□□□ 0.28
COL5A3-201ENST00000264828 PPT1P50897 306 aa16.78■□□□□ 0.28
COL5A3-201ENST00000264828 ARG2P78540 354 aa16.78■□□□□ 0.28
COL5A3-201ENST00000264828 FRMPD2BQ6IN97 320 aa16.78■□□□□ 0.28
COL5A3-201ENST00000264828 KCNIP4Q6PIL6 250 aa16.78■□□□□ 0.28
COL5A3-201ENST00000264828 FBXO46Q6PJ61 603 aaPredicted RBP16.78■□□□□ 0.28
COL5A3-201ENST00000264828 TMEFF1Q8IYR6 380 aa16.78■□□□□ 0.28
COL5A3-201ENST00000264828 SVBPQ8N300 66 aa16.78■□□□□ 0.28
COL5A3-201ENST00000264828 CASD1Q96PB1 797 aa16.78■□□□□ 0.28
COL5A3-201ENST00000264828 OBP2BQ9NPH6 170 aa16.78■□□□□ 0.28
COL5A3-201ENST00000264828 PKD1L3Q7Z443 1732 aa16.78■□□□□ 0.28
COL5A3-201ENST00000264828 ALS2Q96Q42 1657 aa16.78■□□□□ 0.28
COL5A3-201ENST00000264828 ARHGAP33O14559 1287 aa16.78■□□□□ 0.28
COL5A3-201ENST00000264828 ZIC2O95409 532 aaPredicted RBP16.78■□□□□ 0.28
COL5A3-201ENST00000264828 OR8G3PP0DMU2 310 aa16.78■□□□□ 0.28
COL5A3-201ENST00000264828 ZP2Q05996 745 aa16.78■□□□□ 0.28
COL5A3-201ENST00000264828 PARS2Q7L3T8 475 aaKnown RBP16.78■□□□□ 0.28
COL5A3-201ENST00000264828 MCATQ8IVS2 390 aaKnown RBP16.78■□□□□ 0.28
COL5A3-201ENST00000264828 CBARPQ8N350 705 aaPredicted RBP16.78■□□□□ 0.28
COL5A3-201ENST00000264828 FAM3CQ92520 227 aa16.78■□□□□ 0.28
COL5A3-201ENST00000264828 P2RX6O15547 441 aa16.78■□□□□ 0.28
COL5A3-201ENST00000264828 CTSAP10619 480 aa16.78■□□□□ 0.28
COL5A3-201ENST00000264828 TBPL2Q6SJ96 375 aa16.78■□□□□ 0.28
COL5A3-201ENST00000264828 DAZAP1Q96EP5 407 aaKnown RBP16.78■□□□□ 0.28
COL5A3-201ENST00000264828 SLC19A3Q9BZV2 496 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms