RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 ZFP82Q8N141 532 aa15.07■□□□□ 0
CTCF-201ENST00000264010 GDPD1Q8N9F7 314 aa15.07■□□□□ 0
CTCF-201ENST00000264010 SETD6Q8TBK2 473 aa15.07■□□□□ 0
CTCF-201ENST00000264010 GPBAR1Q8TDU6 330 aa15.07■□□□□ 0
CTCF-201ENST00000264010 TCEAL3Q969E4 200 aa15.07■□□□□ 0
CTCF-201ENST00000264010 SIGLEC11Q96RL6 698 aa15.07■□□□□ 0
CTCF-201ENST00000264010 GAS2L1Q99501 681 aaPredicted RBP15.07■□□□□ 0
CTCF-201ENST00000264010 TCEAL2Q9H3H9 227 aaPredicted RBP15.07■□□□□ 0
CTCF-201ENST00000264010 ISYNA1Q9NPH2 558 aa15.07■□□□□ 0
CTCF-201ENST00000264010 CLEC1BQ9P126 229 aa15.07■□□□□ 0
CTCF-201ENST00000264010 MKI67P46013 3256 aaKnown RBP15.07■□□□□ 0
CTCF-201ENST00000264010 HMX3A6NHT5 357 aa15.07■□□□□ 0
CTCF-201ENST00000264010 CCDC85CA6NKD9 419 aa15.07■□□□□ 0
CTCF-201ENST00000264010 SOCS6O14544 535 aa15.07■□□□□ 0
CTCF-201ENST00000264010 IL12BP29460 328 aa15.07■□□□□ 0
CTCF-201ENST00000264010 GPR85P60893 370 aa15.07■□□□□ 0
CTCF-201ENST00000264010 FUT5Q11128 374 aa15.07■□□□□ 0
CTCF-201ENST00000264010 POU4F2Q12837 409 aa15.07■□□□□ 0
CTCF-201ENST00000264010 XKRXQ6PP77 449 aa15.07■□□□□ 0
CTCF-201ENST00000264010 PRSS58Q8IYP2 241 aa15.07■□□□□ 0
CTCF-201ENST00000264010 ZNF433Q8N7K0 673 aaPredicted RBP15.07■□□□□ 0
CTCF-201ENST00000264010 APOBEC4Q8WW27 367 aaKnown RBP15.07■□□□□ 0
CTCF-201ENST00000264010 OR8D2Q9GZM6 311 aa15.07■□□□□ 0
CTCF-201ENST00000264010 ZNF350Q9GZX5 532 aa15.07■□□□□ 0
CTCF-201ENST00000264010 FOLH1BQ9HBA9 442 aa15.07■□□□□ 0
CTCF-201ENST00000264010 ERVK-19Q9WJR5 959 aa15.07■□□□□ 0
CTCF-201ENST00000264010 DSCR3O14972 297 aa15.07■□□□□ 0
CTCF-201ENST00000264010 ANXA3P12429 323 aa15.07■□□□□ 0
CTCF-201ENST00000264010 GLULP15104 373 aa15.07■□□□□ 0
CTCF-201ENST00000264010 HNRNPKP61978 463 aaKnown RBP eCLIP15.07■□□□□ 0
CTCF-201ENST00000264010 GAS6Q14393 721 aa15.07■□□□□ 0
CTCF-201ENST00000264010 LRRC37A5PQ49AS3 106 aa15.07■□□□□ 0
CTCF-201ENST00000264010 CYB561A3Q8NBI2 242 aa15.07■□□□□ 0
CTCF-201ENST00000264010 MAN2C1Q9NTJ4 1040 aa15.07■□□□□ 0
CTCF-201ENST00000264010 KCMF1Q9P0J7 381 aa15.07■□□□□ 0
CTCF-201ENST00000264010 KLF15Q9UIH9 416 aa15.07■□□□□ 0
CTCF-201ENST00000264010 SLC35A3Q9Y2D2 325 aa15.07■□□□□ 0
CTCF-201ENST00000264010 SPTY2D1-AS1A0A0U1RR47 76 aa15.06■□□□□ 0
CTCF-201ENST00000264010 ZNF705EA8MWA4 302 aaPredicted RBP15.06■□□□□ 0
CTCF-201ENST00000264010 CTNSO60931 367 aa15.06■□□□□ 0
CTCF-201ENST00000264010 NDUFB2O95178 105 aa15.06■□□□□ 0
CTCF-201ENST00000264010 ATP1B1P05026 303 aa15.06■□□□□ 0
CTCF-201ENST00000264010 GLAP06280 429 aa15.06■□□□□ 0
CTCF-201ENST00000264010 OMPP47874 163 aa15.06■□□□□ 0
CTCF-201ENST00000264010 ZNF628Q5EBL2 1059 aa15.06■□□□□ 0
CTCF-201ENST00000264010 FRMD1Q8N878 549 aa15.06■□□□□ 0
CTCF-201ENST00000264010 RNASE11Q8TAA1 199 aaKnown RBP15.06■□□□□ 0
CTCF-201ENST00000264010 ASB15Q8WXK1 588 aa15.06■□□□□ 0
CTCF-201ENST00000264010 ST8SIA4Q92187 359 aa15.06■□□□□ 0
CTCF-201ENST00000264010 SLC6A18Q96N87 628 aa15.06■□□□□ 0
CTCF-201ENST00000264010 FUZQ9BT04 418 aa15.06■□□□□ 0
CTCF-201ENST00000264010 IL20Q9NYY1 176 aa15.06■□□□□ 0
CTCF-201ENST00000264010 MRPL15Q9P015 296 aaKnown RBP15.06■□□□□ 0
CTCF-201ENST00000264010 CA14Q9ULX7 337 aa15.06■□□□□ 0
CTCF-201ENST00000264010 TRAV27A0A087WT01 109 aa15.06■□□□□ 0
CTCF-201ENST00000264010 SURF4O15260 269 aa15.06■□□□□ 0
CTCF-201ENST00000264010 GATBO75879 557 aaKnown RBP15.06■□□□□ 0
CTCF-201ENST00000264010 CD38P28907 300 aa15.06■□□□□ 0
CTCF-201ENST00000264010 ULK3Q6PHR2 472 aa15.06■□□□□ 0
CTCF-201ENST00000264010 OR52N1Q8NH53 320 aa15.06■□□□□ 0
CTCF-201ENST00000264010 CNOT9Q92600 299 aaKnown RBP15.06■□□□□ 0
CTCF-201ENST00000264010 CPNE2Q96FN4 548 aaPredicted RBP15.06■□□□□ 0
CTCF-201ENST00000264010 BABAM2Q9NXR7 383 aa15.06■□□□□ 0
CTCF-201ENST00000264010 COPS7AQ9UBW8 275 aa15.06■□□□□ 0
CTCF-201ENST00000264010 EPHA6Q9UF33 1036 aa15.06■□□□□ 0
CTCF-201ENST00000264010 MRPS2Q9Y399 296 aaKnown RBP15.06■□□□□ 0
CTCF-201ENST00000264010 A0A1B0GWA3 101 aa15.06■□□□□ 0
CTCF-201ENST00000264010 TPBGQ13641 420 aa15.06■□□□□ 0
CTCF-201ENST00000264010 SLC25A30Q5SVS4 291 aa15.06■□□□□ 0
CTCF-201ENST00000264010 FCRLBQ6BAA4 426 aa15.06■□□□□ 0
CTCF-201ENST00000264010 MTFR2Q6P444 385 aa15.06■□□□□ 0
CTCF-201ENST00000264010 IDO2Q6ZQW0 420 aa15.06■□□□□ 0
CTCF-201ENST00000264010 PRSS41Q7RTY9 318 aa15.06■□□□□ 0
CTCF-201ENST00000264010 LAX1Q8IWV1 398 aa15.06■□□□□ 0
CTCF-201ENST00000264010 GATSQ8NAP1 163 aa15.06■□□□□ 0
CTCF-201ENST00000264010 OR52E2Q8NGJ4 325 aa15.06■□□□□ 0
CTCF-201ENST00000264010 DPYSL5Q9BPU6 564 aa15.06■□□□□ 0
CTCF-201ENST00000264010 FN3KQ9H479 309 aa15.06■□□□□ 0
CTCF-201ENST00000264010 KDM4EB2RXH2 506 aaPredicted RBP15.05■□□□□ 0
CTCF-201ENST00000264010 FMO6PO60774 539 aa15.05■□□□□ 0
CTCF-201ENST00000264010 HBQ1P09105 142 aa15.05■□□□□ 0
CTCF-201ENST00000264010 ERV3-1Q14264 604 aa15.05■□□□□ 0
CTCF-201ENST00000264010 RNLSQ5VYX0 342 aa15.05■□□□□ 0
CTCF-201ENST00000264010 HEPHL1Q6MZM0 1159 aa15.05■□□□□ 0
CTCF-201ENST00000264010 ALKAL2Q6UX46 152 aa15.05■□□□□ 0
CTCF-201ENST00000264010 DNAJA4Q8WW22 397 aaPredicted RBP15.05■□□□□ 0
CTCF-201ENST00000264010 MAP3K3Q99759 626 aa15.05■□□□□ 0
CTCF-201ENST00000264010 MED20Q9H944 212 aa15.05■□□□□ 0
CTCF-201ENST00000264010 HINT3Q9NQE9 182 aaKnown RBP15.05■□□□□ 0
CTCF-201ENST00000264010 INPP5EQ9NRR6 644 aa15.05■□□□□ 0
CTCF-201ENST00000264010 ZNF879B4DU55 563 aa15.05■□□□□ -0
CTCF-201ENST00000264010 SLC19A2O60779 497 aa15.05■□□□□ -0
CTCF-201ENST00000264010 CFL1P23528 166 aaKnown RBP15.05■□□□□ -0
CTCF-201ENST00000264010 PYCR1P32322 319 aa15.05■□□□□ -0
CTCF-201ENST00000264010 LSM11P83369 360 aaKnown RBP eCLIP15.05■□□□□ -0
CTCF-201ENST00000264010 RAB12Q6IQ22 244 aa15.05■□□□□ -0
CTCF-201ENST00000264010 POMZP3Q6PJE2 187 aa15.05■□□□□ -0
CTCF-201ENST00000264010 CCDC36Q8IYA8 594 aa15.05■□□□□ -0
CTCF-201ENST00000264010 PFN4Q8NHR9 129 aa15.05■□□□□ -0
CTCF-201ENST00000264010 C10orf90Q96M02 699 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms