RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ZP1P60852 638 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 EEF1A1P68104 462 aaKnown RBP11.43□□□□□ -0.58
CHMP3-201ENST00000263856 HTRA3P83110 453 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 ZMYND11Q15326 602 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 AANATQ16613 207 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 C2orf27AQ580R0 203 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 ALKAL2Q6UX46 152 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 ZNF761Q86XN6 746 aaPredicted RBP11.43□□□□□ -0.58
CHMP3-201ENST00000263856 ETFBKMTQ8IXQ9 262 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 PELI1Q96FA3 418 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 NMNAT3Q96T66 252 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 ZNF436Q9C0F3 470 aaPredicted RBP11.43□□□□□ -0.58
CHMP3-201ENST00000263856 TMEM168Q9H0V1 697 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 TSPAN10Q9H1Z9 355 aaPredicted RBP11.43□□□□□ -0.58
CHMP3-201ENST00000263856 GTF2A1LQ9UNN4 478 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 MRPS2Q9Y399 296 aaKnown RBP11.43□□□□□ -0.58
CHMP3-201ENST00000263856 MAB21L2Q9Y586 359 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 FKBP7Q9Y680 259 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 MPDZO75970 2070 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 C4orf47A7E2U8 309 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 J3QRE1 110 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 FKTNO75072 461 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 ARL6IP5O75915 188 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 FGF19O95750 216 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 IFNGP01579 166 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 RPS27P42677 84 aaKnown RBP11.43□□□□□ -0.58
CHMP3-201ENST00000263856 CCR4P51679 360 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 TAS2R43P59537 309 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 TNFRSF17Q02223 184 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 COL28A1Q2UY09 1125 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 AGBL4Q5VU57 503 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 ENPP7Q6UWV6 458 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 TPRA1Q86W33 373 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 MS4A15Q8N5U1 240 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 SPERTQ8NA61 448 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 TSACCQ96A04 125 aaPredicted RBP11.43□□□□□ -0.58
CHMP3-201ENST00000263856 AHCYL2Q96HN2 611 aaKnown RBP11.43□□□□□ -0.58
CHMP3-201ENST00000263856 FGF22Q9HCT0 170 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 TBC1D29Q9UFV1 150 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 H0Y8X5 98 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 L7N2F9 121 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 FGF17O60258 216 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 DBIP07108 87 aaKnown RBP11.42□□□□□ -0.58
CHMP3-201ENST00000263856 ACTR1BP42025 376 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 ACTR1AP61163 376 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 ARHGAP11BQ3KRB8 267 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 TMEM31Q5JXX7 168 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 BTN2A1Q7KYR7 527 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 MFSD9Q8NBP5 474 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 OR4N2Q8NGD1 307 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 RBP7Q96R05 134 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 PITHD1Q9GZP4 211 aaPredicted RBP11.42□□□□□ -0.58
CHMP3-201ENST00000263856 HEXA-AS1Q9H8Q6 139 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 LYARQ9NX58 379 aaKnown RBP11.42□□□□□ -0.58
CHMP3-201ENST00000263856 SLC27A6Q9Y2P4 619 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 A0A1B0GWA3 101 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 OR2W5A6NFC9 320 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 PEX14O75381 377 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 CEACAM5P06731 702 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 NID1P14543 1247 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 EMDP50402 254 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 PSMA6P60900 246 aaKnown RBP11.42□□□□□ -0.58
CHMP3-201ENST00000263856 BDH1Q02338 343 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 PUDPQ08623 228 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 DEFB110Q30KQ9 67 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 PRRT3Q5FWE3 981 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 PRAMEF8Q5VWM4 474 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 PRAMEF7Q5VXH5 474 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 NHLRC1Q6VVB1 395 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 GLRX5Q86SX6 157 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 SLC35F2Q8IXU6 374 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 OR56B4Q8NH76 319 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 RASD2Q96D21 266 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 TSSK2Q96PF2 358 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 RAB11FIP5Q9BXF6 653 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 ZC4H2Q9NQZ6 224 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 CA10Q9NS85 328 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 SCP2D1Q9UJQ7 156 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 ZNF223Q9UK11 482 aaPredicted RBP11.42□□□□□ -0.58
CHMP3-201ENST00000263856 REV3LO60673 3130 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 FXYD6-FXYD2A0A087WZ82 144 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 A0A1W2PPL8 197 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 BLOC1S5-TXNDC5H3BN57 136 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 ARPC5O15511 151 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 OR10H2O60403 315 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 RAD1O60671 282 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 CT62P0C5K7 136 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 DCTDP32321 178 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 ADH7P40394 386 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 MMP15P51511 669 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 KIAA1024LP59773 190 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 DUSP8Q13202 625 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 BTN1A1Q13410 526 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 PDGFRLQ15198 375 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 TMEM69Q5SWH9 247 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 SFRP5Q5T4F7 317 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 C11orf88Q6PI97 169 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 SLITRK4Q8IW52 837 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 TMEM52Q8NDY8 209 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 ZNRF4Q8WWF5 429 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms