RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 LAMTOR5O43504 91 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 UBL3O95164 117 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 CRYZL1O95825 349 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 OR8G3PP0DMU2 310 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 FPR3P25089 353 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 EVI2BP34910 448 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 VEGFBP49765 207 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 LRRC26Q2I0M4 334 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 DEFB133Q30KQ1 61 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 CMTM1Q8IZ96 169 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 LILRA3Q8N6C8 439 aaPredicted RBP10.01□□□□□ -0.81
CD44-201ENST00000263398 ANKLE1Q8NAG6 615 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 OR7G2Q8NG99 324 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 SFXN2Q96NB2 322 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 OR5B12Q96R08 314 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 TNFRSF13CQ96RJ3 184 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 NPAP1Q9NZP6 1156 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 KLHL13Q9P2N7 655 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 REV1Q9UBZ9 1251 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 SLC6A14Q9UN76 642 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 MOKQ9UQ07 419 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 UGT2A1Q9Y4X1 527 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 NRAPQ86VF7 1730 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 EFCAB7A8K855 629 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 FAM227AF5H4B4 570 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 GALR3O60755 368 aaPredicted RBP10.01□□□□□ -0.81
CD44-201ENST00000263398 F13BP05160 661 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 HMGA1P17096 107 aaKnown RBP10.01□□□□□ -0.81
CD44-201ENST00000263398 MAOBP27338 520 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 HLA-DMAP28067 261 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 HTR1FP30939 366 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 TSFMP43897 325 aaKnown RBP10.01□□□□□ -0.81
CD44-201ENST00000263398 FASLGP48023 281 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 FXYD4P59646 89 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 CRMP1Q14194 572 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 CCSMST1Q4G0I0 132 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 FAM78AQ5JUQ0 283 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 GPR157Q5UAW9 335 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 C18orf63Q68DL7 685 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 KIAA0895LQ68EN5 471 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 B3GLCTQ6Y288 498 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 LACC1Q8IV20 430 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 GLB1L2Q8IW92 636 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 FNDC9Q8TBE3 224 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 WFDC5Q8TCV5 224 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 ELP4Q96EB1 424 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 ST6GALNAC5Q9BVH7 336 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 MED20Q9H944 212 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 PRSS16Q9NQE7 514 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 C1GALT1Q9NS00 363 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 TAAR2Q9P1P5 351 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 PGAP2Q9UHJ9 254 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 LSM5Q9Y4Y9 91 aaKnown RBP10.01□□□□□ -0.81
CD44-201ENST00000263398 BCORQ6W2J9 1755 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 TRDV1A0A1B0GX56 115 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 TPT1P13693 172 aaKnown RBP10.01□□□□□ -0.81
CD44-201ENST00000263398 SNRPBP14678 240 aaKnown RBP10.01□□□□□ -0.81
CD44-201ENST00000263398 OTX2P32243 289 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 CSNK1A1P48729 337 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 UBE2NP61088 152 aaKnown RBP10.01□□□□□ -0.81
CD44-201ENST00000263398 SNRPGP62308 76 aaKnown RBP10.01□□□□□ -0.81
CD44-201ENST00000263398 AKR1C8PQ5T2L2 129 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 TMEM185AQ8NFB2 350 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 OR52N1Q8NH53 320 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 CNTNAP3BQ96NU0 1288 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 ALG12Q9BV10 488 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 LMAN1LQ9HAT1 526 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 DOCK2Q92608 1830 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 NUP205Q92621 2012 aa10.01□□□□□ -0.81
CD44-201ENST00000263398 hCG_1807616A0A1W2PRN6 198 aa10□□□□□ -0.81
CD44-201ENST00000263398 ACOD1A6NK06 481 aa10□□□□□ -0.81
CD44-201ENST00000263398 HIDE1A8MVS5 230 aa10□□□□□ -0.81
CD44-201ENST00000263398 SHC1P29353 583 aa10□□□□□ -0.81
CD44-201ENST00000263398 CSNK1G2P78368 415 aa10□□□□□ -0.81
CD44-201ENST00000263398 MRPS21P82921 87 aaKnown RBP10□□□□□ -0.81
CD44-201ENST00000263398 SPOCK1Q08629 439 aa10□□□□□ -0.81
CD44-201ENST00000263398 SLC22A6Q4U2R8 563 aa10□□□□□ -0.81
CD44-201ENST00000263398 SLC48A1Q6P1K1 146 aa10□□□□□ -0.81
CD44-201ENST00000263398 ZNF529Q6P280 563 aa10□□□□□ -0.81
CD44-201ENST00000263398 ZNF585AQ6P3V2 769 aa10□□□□□ -0.81
CD44-201ENST00000263398 SFXN4Q6P4A7 337 aa10□□□□□ -0.81
CD44-201ENST00000263398 ABHD17CQ6PCB6 329 aa10□□□□□ -0.81
CD44-201ENST00000263398 PLPP6Q8IY26 295 aa10□□□□□ -0.81
CD44-201ENST00000263398 BPIFB2Q8N4F0 458 aa10□□□□□ -0.81
CD44-201ENST00000263398 OR14K1Q8NGZ2 314 aa10□□□□□ -0.81
CD44-201ENST00000263398 GLYATL2Q8WU03 294 aa10□□□□□ -0.81
CD44-201ENST00000263398 UBE2FQ969M7 185 aa10□□□□□ -0.81
CD44-201ENST00000263398 OSGIN1Q9UJX0 560 aa10□□□□□ -0.81
CD44-201ENST00000263398 PPT2Q9UMR5 302 aa10□□□□□ -0.81
CD44-201ENST00000263398 PCDHGA6Q9Y5G7 932 aa10□□□□□ -0.81
CD44-201ENST00000263398 TMEM72A0PK05 275 aa10□□□□□ -0.81
CD44-201ENST00000263398 C1orf196B1AJZ1 125 aa10□□□□□ -0.81
CD44-201ENST00000263398 CSO75390 466 aaKnown RBP10□□□□□ -0.81
CD44-201ENST00000263398 NCR1O76036 304 aa10□□□□□ -0.81
CD44-201ENST00000263398 IDUAP35475 653 aa10□□□□□ -0.81
CD44-201ENST00000263398 POU4F3Q15319 338 aa10□□□□□ -0.81
CD44-201ENST00000263398 UBE2NLQ5JXB2 153 aa10□□□□□ -0.81
CD44-201ENST00000263398 ABHD4Q8TB40 342 aa10□□□□□ -0.81
CD44-201ENST00000263398 PHYHIPQ92561 330 aa10□□□□□ -0.81
CD44-201ENST00000263398 RPH3AQ9Y2J0 694 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms