RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 GABRA1P14867 456 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 HOXB6P17509 224 aaKnown RBP14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 FUT4P22083 530 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 GNLYP22749 145 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 SLC7A1P30825 629 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 CCNIQ14094 377 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 ZNF585AQ6P3V2 769 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 ADGRE4PQ86SQ3 457 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 NKAIN4Q8IVV8 208 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 OR10D3Q8NH80 312 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 OR2V1Q8NHB1 315 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 STK35Q8TDR2 534 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 OR5B2Q96R09 309 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 TUBA1CQ9BQE3 449 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 FNDC11Q9BVV2 318 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 POTEKPQ9BYX7 375 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 TP63Q9H3D4 680 aaPredicted RBP14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 COQ10BQ9H8M1 238 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 NMNAT1Q9HAN9 279 aaPredicted RBP14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 MAN2C1Q9NTJ4 1040 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 RHCGQ9UBD6 479 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 TINAGQ9UJW2 476 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 AURKCQ9UQB9 309 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 OSGIN2Q9Y236 505 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 HDGFL3Q9Y3E1 203 aa14.94□□□□□ -0.02
CHCHD3-201ENST00000262570 A0A1W2PNR3 127 aa14.93□□□□□ -0.02
CHCHD3-201ENST00000262570 PTGER4P35408 488 aa14.93□□□□□ -0.02
CHCHD3-201ENST00000262570 UQCRFS1P47985 274 aa14.93□□□□□ -0.02
CHCHD3-201ENST00000262570 ACTR3P61158 418 aa14.93□□□□□ -0.02
CHCHD3-201ENST00000262570 RPS3AP61247 264 aaKnown RBP14.93□□□□□ -0.02
CHCHD3-201ENST00000262570 MYBPHQ13203 477 aa14.93□□□□□ -0.02
CHCHD3-201ENST00000262570 EIF2S3LQ2VIR3 472 aaKnown RBP14.93□□□□□ -0.02
CHCHD3-201ENST00000262570 PDSS1Q5T2R2 415 aa14.93□□□□□ -0.02
CHCHD3-201ENST00000262570 C1QL3Q5VWW1 255 aa14.93□□□□□ -0.02
CHCHD3-201ENST00000262570 HBMQ6B0K9 141 aa14.93□□□□□ -0.02
CHCHD3-201ENST00000262570 TMPPEQ6ZT21 453 aa14.93□□□□□ -0.02
CHCHD3-201ENST00000262570 PIK3C3Q8NEB9 887 aa14.93□□□□□ -0.02
CHCHD3-201ENST00000262570 ZNF347Q96SE7 839 aa14.93□□□□□ -0.02
CHCHD3-201ENST00000262570 PIP5K1AQ99755 562 aa14.93□□□□□ -0.02
CHCHD3-201ENST00000262570 TMEM43Q9BTV4 400 aa14.93□□□□□ -0.02
CHCHD3-201ENST00000262570 CHID1Q9BWS9 393 aa14.93□□□□□ -0.02
CHCHD3-201ENST00000262570 CCM2LQ9NUG4 571 aaPredicted RBP14.93□□□□□ -0.02
CHCHD3-201ENST00000262570 MT-ND1P03886 318 aa14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 HOXD4P09016 255 aaPredicted RBP14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 ACVR2AP27037 513 aa14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 CA7P43166 264 aa14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 EIF1AXP47813 144 aaKnown RBP14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 CARD18P57730 90 aa14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 TRAM2Q15035 370 aa14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 SF3B4Q15427 424 aaKnown RBP eCLIP14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 C1orf140Q5VVS0 124 aa14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 RTL6Q6ICC9 239 aa14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 C5orf46Q6UWT4 87 aa14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 PAPD5Q8NDF8 572 aaKnown RBP14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 OSTF1Q92882 214 aa14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 SLCO4A1Q96BD0 722 aa14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 ZNF845Q96IR2 970 aaPredicted RBP14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 DHRS1Q96LJ7 313 aa14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 UCN2Q96RP3 112 aa14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 ANKRD19PQ9H560 264 aa14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 PAQR5Q9NXK6 330 aaPredicted RBP14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 TRAPPC4Q9Y296 219 aa14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 FAM215AQ9Y5M1 114 aa14.92□□□□□ -0.02
CHCHD3-201ENST00000262570 TRGV8A0A0C4DH27 118 aa14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 A0A1W2PRQ8 180 aa14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 CXCL13O43927 109 aa14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 PMS2P2O95744 297 aa14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 IMPDH2P12268 514 aa14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 RBM34P42696 430 aaKnown RBP14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 DIO1P49895 249 aa14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 CASP6P55212 293 aa14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 RAC3P60763 192 aa14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 DGCR6Q14129 220 aa14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 ESPL1Q14674 2120 aa14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 KPNB1Q14974 876 aaKnown RBP14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 SGCBQ16585 318 aa14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 ACSF3Q4G176 576 aaPredicted RBP14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 TTC33Q6PID6 262 aaPredicted RBP14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 C3P1Q6ZMU1 363 aa14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 CHMP1BQ7LBR1 199 aa14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 P3H2Q8IVL5 708 aa14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 TMEM255BQ8WV15 326 aa14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 KTI12Q96EK9 354 aaPredicted RBP14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 DUS3LQ96G46 650 aaKnown RBP14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 RSRC1Q96IZ7 334 aaKnown RBP14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 HS6ST2Q96MM7 605 aa14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 SLC19A3Q9BZV2 496 aa14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 DENND2DQ9H6A0 471 aaPredicted RBP14.91□□□□□ -0.02
CHCHD3-201ENST00000262570 CLCA1A8K7I4 914 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 ANKRD65E5RJM6 399 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 SULT2B1O00204 365 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 H1F0P07305 194 aaKnown RBP14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 PTNP21246 168 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 CSNK2A1P68400 391 aaPredicted RBP14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 FOXD4Q12950 439 aaPredicted RBP14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 NSUN5P2Q63ZY6 315 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 PRR7Q8TB68 274 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 SLC7A13Q8TCU3 470 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 TMEM239Q8WW34 195 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 DNAJA3Q96EY1 480 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms