RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 FRRS1Q6ZNA5 592 aa10.8□□□□□ -0.68
TRAF4-202ENST00000262396 ABHD12BQ7Z5M8 362 aaPredicted RBP10.8□□□□□ -0.68
TRAF4-202ENST00000262396 GPAT4Q86UL3 456 aa10.8□□□□□ -0.68
TRAF4-202ENST00000262396 CMIPQ8IY22 773 aa10.8□□□□□ -0.68
TRAF4-202ENST00000262396 MUC15Q8N387 334 aa10.8□□□□□ -0.68
TRAF4-202ENST00000262396 CADM2Q8N3J6 435 aa10.8□□□□□ -0.68
TRAF4-202ENST00000262396 PNPT1Q8TCS8 783 aaKnown RBP10.8□□□□□ -0.68
TRAF4-202ENST00000262396 AENQ8WTP8 325 aaKnown RBP10.8□□□□□ -0.68
TRAF4-202ENST00000262396 ZBTB9Q96C00 473 aa10.8□□□□□ -0.68
TRAF4-202ENST00000262396 ARL5BQ96KC2 179 aa10.8□□□□□ -0.68
TRAF4-202ENST00000262396 TRNT1Q96Q11 434 aaKnown RBP10.8□□□□□ -0.68
TRAF4-202ENST00000262396 DHRS9Q9BPW9 319 aa10.8□□□□□ -0.68
TRAF4-202ENST00000262396 CCDC106Q9BWC9 280 aa10.8□□□□□ -0.68
TRAF4-202ENST00000262396 ARMC7Q9H6L4 198 aa10.8□□□□□ -0.68
TRAF4-202ENST00000262396 MTHFD2LQ9H903 347 aaPredicted RBP10.8□□□□□ -0.68
TRAF4-202ENST00000262396 EXOSC3Q9NQT5 275 aaKnown RBP10.8□□□□□ -0.68
TRAF4-202ENST00000262396 CBLN4Q9NTU7 201 aa10.8□□□□□ -0.68
TRAF4-202ENST00000262396 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.8□□□□□ -0.68
TRAF4-202ENST00000262396 ING1Q9UK53 422 aaPredicted RBP10.8□□□□□ -0.68
TRAF4-202ENST00000262396 V9GYY5 206 aaPredicted RBP10.8□□□□□ -0.68
TRAF4-202ENST00000262396 HEATR5AQ86XA9 2040 aa10.8□□□□□ -0.68
TRAF4-202ENST00000262396 IGKV3D-15A0A087WSY6 115 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 CLDN24A6NM45 220 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 TRPC5OSA6NMA1 111 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 SHISA9B4DS77 424 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 RFXANKO14593 260 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 NDUFS7O75251 213 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 GSNP06396 782 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 GPIP06744 558 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 DBIP07108 87 aaKnown RBP10.79□□□□□ -0.68
TRAF4-202ENST00000262396 KITP10721 976 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 CD40P25942 277 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 GTF2E2P29084 291 aaKnown RBP10.79□□□□□ -0.68
TRAF4-202ENST00000262396 TTKP33981 857 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 CRATP43155 626 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 ETV4P43268 484 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 DSCR9P59020 149 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 CASP8Q14790 479 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 SYPL1Q16563 259 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 OTUD3Q5T2D3 398 aaPredicted RBP10.79□□□□□ -0.68
TRAF4-202ENST00000262396 TMEM225Q6GV28 225 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 PODNL1Q6PEZ8 512 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 LRRC74BQ6ZQY2 392 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 SPATA19Q7Z5L4 167 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 CROCCP2Q86T23 111 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 ADGRG3Q86Y34 549 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 ZNF440Q8IYI8 595 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 ANKFN1Q8N957 763 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 OR52E4Q8NGH9 312 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 CNOT9Q92600 299 aaKnown RBP10.79□□□□□ -0.68
TRAF4-202ENST00000262396 ZNF75CPQ92670 426 aaPredicted RBP10.79□□□□□ -0.68
TRAF4-202ENST00000262396 ZNF524Q96C55 264 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 TMEM109Q9BVC6 243 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 PNPOQ9NVS9 261 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 P2RX2Q9UBL9 471 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 BTNL2Q9UIR0 455 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 ZNF232Q9UNY5 417 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 TRAPPC4Q9Y296 219 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 B3GALT5Q9Y2C3 310 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 AMDHD2Q9Y303 409 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 JMJD1CQ15652 2540 aa10.79□□□□□ -0.68
TRAF4-202ENST00000262396 TMEM72A0PK05 275 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 ZNF716A6NP11 495 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 RNF212BA8MTL3 300 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 A8MV72 311 aaPredicted RBP10.78□□□□□ -0.68
TRAF4-202ENST00000262396 HMGN4O00479 90 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 AP3D1O14617 1153 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 ZNF208O43345 1280 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 CD5LO43866 347 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 DNAJA2O60884 412 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 PGM3O95394 542 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 GUSBP08236 651 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 EDNRAP25101 427 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 SLC1A3P43003 542 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 MAP2K6P52564 334 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 PRPS1P60891 318 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 UBE2NP61088 152 aaKnown RBP10.78□□□□□ -0.68
TRAF4-202ENST00000262396 UFM1P61960 85 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 LARS2Q15031 903 aaKnown RBP10.78□□□□□ -0.68
TRAF4-202ENST00000262396 OR7A5Q15622 319 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 CARTPTQ16568 116 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 CHRFAM7AQ494W8 412 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 LIN52Q52LA3 116 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 WDR93Q6P2C0 686 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 DNAJC14Q6Y2X3 702 aaPredicted RBP10.78□□□□□ -0.68
TRAF4-202ENST00000262396 AAED1Q7RTV5 226 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 DTX2Q86UW9 622 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 LRRC34Q8IZ02 419 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 MGARPQ8TDB4 240 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 ZG16BQ96DA0 208 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 CCDC115Q96NT0 180 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 KCNK17Q96T54 332 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 MDFIQ99750 246 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 INPP5KQ9BT40 448 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 SAP130Q9H0E3 1048 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 RMND5AQ9H871 391 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 SSU72Q9NP77 194 aaKnown RBP10.78□□□□□ -0.68
TRAF4-202ENST00000262396 NPAP1Q9NZP6 1156 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 CALML5Q9NZT1 146 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 OSGIN1Q9UJX0 560 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms