RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 VASPP50552 380 aaPredicted RBP13.36□□□□□ -0.27
CUX2-201ENST00000261726 RNLSQ5VYX0 342 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 OGFOD3Q6PK18 319 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 SLC22A25Q6T423 547 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 LRFN5Q96NI6 719 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 UHRF2Q96PU4 802 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 OR7D2Q96RA2 312 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 C1QTNF2Q9BXJ5 285 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 METTL9Q9H1A3 318 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 SLAMF7Q9NQ25 335 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 NWD2Q9ULI1 1742 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 MYADML2A6NDP7 307 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 BHLHE40O14503 412 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 DCTP40126 519 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 OR8B8Q15620 311 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 TRIM61Q5EBN2 209 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 UBE2NLQ5JXB2 153 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 SLC39A5Q6ZMH5 540 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 BPIFB2Q8N4F0 458 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 STEAP1Q9UHE8 339 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 A0A0B4J2A0 478 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 OR7C1O76099 320 aaPredicted RBP13.35□□□□□ -0.27
CUX2-201ENST00000261726 CEBPBP17676 345 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 PCBD1P61457 104 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 KEAP1Q14145 624 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 OR1Q1Q15612 314 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 C9orf152Q5JTZ5 239 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 SPARTQ8N0X7 666 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 OR11L1Q8NGX0 322 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 CD200R1Q8TD46 325 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 PATZ1Q9HBE1 687 aaKnown RBP13.35□□□□□ -0.27
CUX2-201ENST00000261726 DECR2Q9NUI1 292 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 LUZP4Q9P127 313 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 SHPKQ9UHJ6 478 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 MROH6A6NGR9 719 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 C17orf112F2Z3M2 114 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 FADS1O60427 444 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 PTHP01270 115 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 TAS2R19P59542 299 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 ZNF92Q03936 586 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 ZNF789Q5FWF6 425 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 HSD11B1LQ7Z5J1 315 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 ZNF300Q96RE9 604 aaPredicted RBP13.35□□□□□ -0.27
CUX2-201ENST00000261726 OR52D1Q9H346 318 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 TMEM184BQ9Y519 407 aaPredicted RBP13.35□□□□□ -0.27
CUX2-201ENST00000261726 STYXL1Q9Y6J8 313 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 MYH7P12883 1935 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 MYH10P35580 1976 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 F10P00742 488 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 PSMB5P28074 263 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 LBX1P52954 281 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 MEPCEQ7L2J0 689 aaKnown RBP13.35□□□□□ -0.27
CUX2-201ENST00000261726 ZNF546Q86UE3 836 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 CMIPQ8IY22 773 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 ULBP3Q9BZM4 244 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 CD207Q9UJ71 328 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 FUOMA2VDF0 154 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 RNF212BA8MTL3 300 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 FZD9O00144 591 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 CA3P07451 260 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 RPA2P15927 270 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 SNCAP37840 140 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 HES1Q14469 280 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 IRF4Q15306 451 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 KHDC1LQ5JSQ8 128 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 DNAJC5GQ8N7S2 189 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 OR4F15Q8NGB8 312 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 LINC01599Q8WXQ3 324 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 MYOTQ9UBF9 498 aa13.35□□□□□ -0.27
CUX2-201ENST00000261726 CICQ96RK0 1608 aaPredicted RBP13.35□□□□□ -0.27
CUX2-201ENST00000261726 J3KTA2 159 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 UBBP0CG47 229 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 UBCP0CG48 685 aaKnown RBP13.34□□□□□ -0.27
CUX2-201ENST00000261726 GM2AP17900 193 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 ZNF684Q5T5D7 378 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 PODNL1Q6PEZ8 512 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 GIMAP1Q8WWP7 306 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 ANKRD9Q96BM1 317 aaPredicted RBP13.34□□□□□ -0.27
CUX2-201ENST00000261726 GALNT9Q9HCQ5 603 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 GNG12Q9UBI6 72 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 SCML1Q9UN30 329 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 ENTPD2Q9Y5L3 495 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 OR7A17O14581 309 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 CD46P15529 392 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 BCKDHBP21953 392 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
CUX2-201ENST00000261726 CLDN17P56750 224 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 IL34Q6ZMJ4 242 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 SECTM1Q8WVN6 248 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 INTS12Q96CB8 462 aaKnown RBP13.34□□□□□ -0.27
CUX2-201ENST00000261726 ELP4Q96EB1 424 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 NKX3-1Q99801 234 aaPredicted RBP13.34□□□□□ -0.27
CUX2-201ENST00000261726 GINS3Q9BRX5 216 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 ARHGAP39Q9C0H5 1083 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 SLC6A20Q9NP91 592 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 SGCEO43556 437 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 MPEG1Q2M385 716 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 WBP2NLQ6ICG8 309 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 PRICKLE2Q7Z3G6 844 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 MMP21Q8N119 569 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms