RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 PTHLHP12272 177 aa7.03□□□□□ -1.28
RIF1-201ENST00000243326 ELOAQ14241 798 aaKnown RBP7.03□□□□□ -1.28
RIF1-201ENST00000243326 TMEM163Q8TC26 289 aa7.03□□□□□ -1.28
RIF1-201ENST00000243326 CNTNAP3Q9BZ76 1288 aa7.03□□□□□ -1.28
RIF1-201ENST00000243326 MEPEQ9NQ76 525 aaPredicted RBP7.03□□□□□ -1.28
RIF1-201ENST00000243326 TP53BP1Q12888 1972 aaPredicted RBP7.03□□□□□ -1.28
RIF1-201ENST00000243326 P2RY10O00398 339 aa7.03□□□□□ -1.28
RIF1-201ENST00000243326 MRPS34P82930 218 aaKnown RBP7.03□□□□□ -1.28
RIF1-201ENST00000243326 GPM6BQ13491 265 aa7.03□□□□□ -1.28
RIF1-201ENST00000243326 SETD7Q8WTS6 366 aaKnown RBP7.03□□□□□ -1.28
RIF1-201ENST00000243326 NOX4Q9NPH5 578 aa7.03□□□□□ -1.28
RIF1-201ENST00000243326 NFKBIEO00221 500 aa7.03□□□□□ -1.28
RIF1-201ENST00000243326 OR52W1Q6IF63 320 aa7.03□□□□□ -1.28
RIF1-201ENST00000243326 CA5BP1Q8WTZ4 195 aa7.03□□□□□ -1.28
RIF1-201ENST00000243326 ASB6Q9NWX5 421 aa7.03□□□□□ -1.28
RIF1-201ENST00000243326 PCDHGA1Q9Y5H4 931 aa7.03□□□□□ -1.28
RIF1-201ENST00000243326 IRS1P35568 1242 aa7.02□□□□□ -1.28
RIF1-201ENST00000243326 FAM27D1Q5T7N8 215 aa7.02□□□□□ -1.28
RIF1-201ENST00000243326 C3orf33Q6P1S2 294 aa7.02□□□□□ -1.28
RIF1-201ENST00000243326 SLC46A3Q7Z3Q1 461 aa7.02□□□□□ -1.28
RIF1-201ENST00000243326 ATF6BQ99941 703 aa7.02□□□□□ -1.28
RIF1-201ENST00000243326 C20orf85Q9H1P6 137 aa7.02□□□□□ -1.28
RIF1-201ENST00000243326 ZNF334Q9HCZ1 680 aaPredicted RBP7.02□□□□□ -1.28
RIF1-201ENST00000243326 HSD17B6O14756 317 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 TAPBPO15533 448 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 ARHGEF15O94989 841 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 IL32P24001 234 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 SELENBP1Q13228 472 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 SPATS1Q496A3 300 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 TTLQ8NG68 377 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 OCSTAMPQ9BR26 566 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 ACTL8Q9H568 366 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 KCNJ16Q9NPI9 418 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 TREX1Q9NSU2 369 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 CLDND1Q9NY35 253 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 PPP4R1LQ9P1A2 415 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 FGF18O76093 207 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 LDOC1O95751 146 aaPredicted RBP7.02□□□□□ -1.29
RIF1-201ENST00000243326 C1SP09871 688 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 SLC6A11P48066 632 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 PBDC1Q9BVG4 233 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 ING1Q9UK53 422 aaPredicted RBP7.02□□□□□ -1.29
RIF1-201ENST00000243326 LOXHD1Q8IVV2 1947 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 UBBP0CG47 229 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 UBCP0CG48 685 aaKnown RBP7.02□□□□□ -1.29
RIF1-201ENST00000243326 RPS27P42677 84 aaKnown RBP7.02□□□□□ -1.29
RIF1-201ENST00000243326 RAET1LQ5VY80 246 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 FJX1Q86VR8 437 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 IRF7Q92985 503 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 ELP4Q96EB1 424 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 SAMD10Q9BYL1 202 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 TPSD1Q9BZJ3 242 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 LRIT2A6NDA9 550 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 ZNF780AO75290 641 aaPredicted RBP7.02□□□□□ -1.29
RIF1-201ENST00000243326 HTD2P86397 168 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 MELKQ14680 651 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.02□□□□□ -1.292e-7■■■■□ 24.8
RIF1-201ENST00000243326 C12orf40Q86WS4 652 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 ZNF619Q8N2I2 560 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 MRI1Q9BV20 369 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 NARFLQ9H6Q4 476 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 A0A1B0GTL3 188 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 A0A1W2PQ45 241 aaPredicted RBP7.02□□□□□ -1.29
RIF1-201ENST00000243326 A0A1W2PQY0 241 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 ZNF840PA6NDX5 716 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 LILRB5O75023 590 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 OR56B4Q8NH76 319 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 TMEM255BQ8WV15 326 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 NELFAQ9H3P2 528 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 ARNT2Q9HBZ2 717 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 SEMA4GQ9NTN9 838 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 BTNL2Q9UIR0 455 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 CA14Q9ULX7 337 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 CIB4A0PJX0 185 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 FBLP22087 321 aaKnown RBP7.02□□□□□ -1.29
RIF1-201ENST00000243326 LRRC26Q2I0M4 334 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 PAPD4Q6PIY7 484 aaKnown RBP7.02□□□□□ -1.29
RIF1-201ENST00000243326 DCAF4L2Q8NA75 395 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 FUBP3Q96I24 572 aaKnown RBP eCLIP7.02□□□□□ -1.299e-8■■■□□ 17.4
RIF1-201ENST00000243326 SOX9P48436 509 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 DUSP6Q16828 381 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 CLLU1OSQ5K130 101 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 TNFRSF13CQ96RJ3 184 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 RSRP1Q9BUV0 290 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 PRO1933Q9H354 126 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 KLHL21Q9UJP4 597 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 GGT3PA6NGU5 568 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 PM20D1Q6GTS8 502 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 TMEM239Q8WW34 195 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 LDAHQ9H6V9 325 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 LRRTM2O43300 516 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 RPLP2P05387 115 aaKnown RBP7.02□□□□□ -1.29
RIF1-201ENST00000243326 ASCL1P50553 236 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 RPS16P62249 146 aaKnown RBP7.02□□□□□ -1.29
RIF1-201ENST00000243326 FIGLAQ6QHK4 219 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 ZNF322Q6U7Q0 402 aaPredicted RBP7.02□□□□□ -1.29
RIF1-201ENST00000243326 SLC16A10Q8TF71 515 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 SLC41A2Q96JW4 573 aa7.02□□□□□ -1.29
RIF1-201ENST00000243326 NKX6-2Q9C056 277 aaPredicted RBP7.02□□□□□ -1.29
RIF1-201ENST00000243326 EHFQ9NZC4 300 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms