RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 OR2L13Q8N349 312 aa14.3□□□□□ -0.12
DDX55-201ENST00000238146 KCT2Q8NC54 265 aa14.3□□□□□ -0.12
DDX55-201ENST00000238146 OR52E1Q8NGJ3 308 aa14.3□□□□□ -0.12
DDX55-201ENST00000238146 ST8SIA4Q92187 359 aa14.3□□□□□ -0.12
DDX55-201ENST00000238146 SPHK1Q9NYA1 384 aa14.3□□□□□ -0.12
DDX55-201ENST00000238146 USP36Q9P275 1121 aaKnown RBP14.3□□□□□ -0.12
DDX55-201ENST00000238146 ING1Q9UK53 422 aaPredicted RBP14.3□□□□□ -0.12
DDX55-201ENST00000238146 SLC27A6Q9Y2P4 619 aa14.3□□□□□ -0.12
DDX55-201ENST00000238146 OR1A2Q9Y585 309 aa14.3□□□□□ -0.12
DDX55-201ENST00000238146 NOTCH4Q99466 2003 aa14.3□□□□□ -0.12
DDX55-201ENST00000238146 TRBV2A0A0J9YWF9 115 aa14.3□□□□□ -0.12
DDX55-201ENST00000238146 OR52A4PA6NMU1 304 aa14.3□□□□□ -0.12
DDX55-201ENST00000238146 GALR3O60755 368 aaPredicted RBP14.3□□□□□ -0.12
DDX55-201ENST00000238146 RPS4Y1P22090 263 aaKnown RBP14.3□□□□□ -0.12
DDX55-201ENST00000238146 PEBP1P30086 187 aaKnown RBP14.3□□□□□ -0.12
DDX55-201ENST00000238146 SFRP5Q5T4F7 317 aa14.3□□□□□ -0.12
DDX55-201ENST00000238146 SFTPA1Q8IWL2 248 aa14.3□□□□□ -0.12
DDX55-201ENST00000238146 ZNF619Q8N2I2 560 aa14.3□□□□□ -0.12
DDX55-201ENST00000238146 DOK4Q8TEW6 326 aa14.3□□□□□ -0.12
DDX55-201ENST00000238146 TNFRSF13CQ96RJ3 184 aa14.3□□□□□ -0.12
DDX55-201ENST00000238146 KLHL9Q9P2J3 617 aa14.3□□□□□ -0.12
DDX55-201ENST00000238146 ZNF69Q9UC07 566 aa14.3□□□□□ -0.12
DDX55-201ENST00000238146 ABT1Q9ULW3 272 aaKnown RBP14.3□□□□□ -0.12
DDX55-201ENST00000238146 KCNK6Q9Y257 313 aa14.3□□□□□ -0.12
DDX55-201ENST00000238146 OR2M5A3KFT3 312 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 PIN1P1O15428 100 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 KRT33AO76009 404 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 DBIP07108 87 aaKnown RBP14.29□□□□□ -0.12
DDX55-201ENST00000238146 NID1P14543 1247 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 SRMP19623 302 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 ANXA7P20073 488 aaKnown RBP14.29□□□□□ -0.12
DDX55-201ENST00000238146 AP3S2P59780 193 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 PSMA6P60900 246 aaKnown RBP14.29□□□□□ -0.12
DDX55-201ENST00000238146 OR5M10Q6IEU7 315 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 FAAP20Q6NZ36 180 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 UNQ9370/PRO34162Q6UXP9 181 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 SYS1Q8N2H4 156 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 MEIOBQ8N635 442 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 OR51L1Q8NGJ5 315 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 NOX4Q9NPH5 578 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 CD93Q9NPY3 652 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 MED9Q9NWA0 146 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 RABL2AQ9UBK7 228 aaPredicted RBP14.29□□□□□ -0.12
DDX55-201ENST00000238146 FBXL3Q9UKT7 428 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 RABL2BQ9UNT1 228 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 PCDHGA5Q9Y5G8 931 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 OR6C65A6NJZ3 312 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 IFITM5A6NNB3 132 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 KHDRBS3O75525 346 aaKnown RBP14.29□□□□□ -0.12
DDX55-201ENST00000238146 OR2A4O95047 310 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 DPP4P27487 766 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 PTH2RP49190 550 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 RAP2BP61225 183 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 KRT33BQ14525 404 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 LINC00303Q3SY05 128 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 TRMT12Q53H54 448 aaKnown RBP14.29□□□□□ -0.12
DDX55-201ENST00000238146 RPL22L1Q6P5R6 122 aaKnown RBP14.29□□□□□ -0.12
DDX55-201ENST00000238146 MTSS1LQ765P7 747 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 FCRLAQ7L513 359 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 MFSD9Q8NBP5 474 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 THEM6Q8WUY1 208 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 ING5Q8WYH8 240 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 CNOT9Q92600 299 aaKnown RBP14.29□□□□□ -0.12
DDX55-201ENST00000238146 OR2A7Q96R45 310 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 MBNL1Q9NR56 388 aaKnown RBP14.29□□□□□ -0.12
DDX55-201ENST00000238146 POT1Q9NUX5 634 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 TAS2R5Q9NYW4 299 aa14.29□□□□□ -0.12
DDX55-201ENST00000238146 ANKRD61A6NGH8 418 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 PTHLHP12272 177 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 EDNRAP25101 427 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 NAA10P41227 235 aaPredicted RBP14.28□□□□□ -0.12
DDX55-201ENST00000238146 KIAA1024LP59773 190 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 ACTA2P62736 377 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 ACTG2P63267 376 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 NUDT18Q6ZVK8 323 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 FCAMRQ8WWV6 532 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 TMPRSS13Q9BYE2 586 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 ZDHHC4Q9NPG8 344 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 GNG8Q9UK08 70 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 BAIAP2Q9UQB8 552 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 PLEKHM1Q9Y4G2 1056 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 ANKRD20A5PA0PJZ0 165 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 AIPO00170 330 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 NARSO43776 548 aaKnown RBP14.28□□□□□ -0.12
DDX55-201ENST00000238146 PCDH8O95206 1070 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 FGF19O95750 216 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 OR2T7P0C7T2 308 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 PSMB10P40306 273 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 CLDN12P56749 244 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 PLAURQ03405 335 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 FHL1Q13642 323 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 ZNF234Q14588 700 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 DCST2Q5T1A1 773 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 STPG1Q5TH74 334 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 ZNF626Q68DY1 528 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 NHLRC1Q6VVB1 395 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 OVCH2Q7RTZ1 564 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 OR52E2Q8NGJ4 325 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 OR2T27Q8NH04 317 aa14.28□□□□□ -0.12
DDX55-201ENST00000238146 GRHL3Q8TE85 626 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms