RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 SYT14P1Q58G82 188 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 C5orf46Q6UWT4 87 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 TMPPEQ6ZT21 453 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 CCDC71Q8IV32 467 aaPredicted RBP10.12□□□□□ -0.79
SF3B6-201ENST00000233468 ZNF295-AS1Q8N0V1 137 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 SLC43A2Q8N370 569 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 LSMEM1Q8N8F7 131 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 SMYD1Q8NB12 490 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 OR52E4Q8NGH9 312 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 ITPKCQ96DU7 683 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 NSL1Q96IY1 281 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 ADGRG7Q96K78 797 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 LURAP1Q96LR2 239 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 OR5B2Q96R09 309 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 KCTD14Q9BQ13 255 aaPredicted RBP10.12□□□□□ -0.79
SF3B6-201ENST00000233468 OCSTAMPQ9BR26 566 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 TACO1Q9BSH4 297 aaKnown RBP10.12□□□□□ -0.79
SF3B6-201ENST00000233468 ADAM19Q9H013 955 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 PIGMQ9H3S5 423 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 ZFAND3Q9H8U3 227 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 FANCFQ9NPI8 374 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 CTPS2Q9NRF8 586 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 ADPRHL2Q9NX46 363 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 CMTM6Q9NX76 183 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 ADA2Q9NZK5 511 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 OSGIN1Q9UJX0 560 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 ITGB1BP2Q9UKP3 347 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 TMED7Q9Y3B3 224 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 EMC9Q9Y3B6 208 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 MAP1AP78559 2803 aaPredicted RBP10.12□□□□□ -0.79
SF3B6-201ENST00000233468 ELOA3DA6NLF2 546 aaPredicted RBP10.11□□□□□ -0.79
SF3B6-201ENST00000233468 CCT8L1PA6NM43 557 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 A8MVM7 634 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 H0YC42 278 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 SULT2B1O00204 365 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 CXCL13O43927 109 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 EIF1BO60739 113 aaKnown RBP10.11□□□□□ -0.79
SF3B6-201ENST00000233468 OPN1LWP04000 364 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 FESP07332 822 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 IL11P20809 199 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 BMP5P22003 454 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 ENPP1P22413 925 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 CALB2P22676 271 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 KDELR2P33947 212 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 TPD52P55327 224 aaPredicted RBP10.11□□□□□ -0.79
SF3B6-201ENST00000233468 CTBP2P56545 445 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 KRTAP10-9P60411 292 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 DMTNQ08495 405 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 CTU2Q2VPK5 515 aaKnown RBP10.11□□□□□ -0.79
SF3B6-201ENST00000233468 ELOA3BQ3SY89 546 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 SAMD4BQ5PRF9 694 aaKnown RBP10.11□□□□□ -0.79
SF3B6-201ENST00000233468 C8orf82Q6P1X6 216 aaPredicted RBP10.11□□□□□ -0.79
SF3B6-201ENST00000233468 ULK3Q6PHR2 472 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 SEM1Q6ZVN7 128 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 ADGRG3Q86Y34 549 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 PGAM4Q8N0Y7 254 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 FITM2Q8N6M3 262 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 C9orf106Q8NAJ2 232 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 ELOA3Q8NG57 546 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 FNDC9Q8TBE3 224 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 INTS12Q96CB8 462 aaKnown RBP10.11□□□□□ -0.79
SF3B6-201ENST00000233468 GMPPAQ96IJ6 420 aaPredicted RBP10.11□□□□□ -0.79
SF3B6-201ENST00000233468 KLHDC3Q9BQ90 382 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 TAPBPLQ9BX59 468 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 POTEKPQ9BYX7 375 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 RNF122Q9H9V4 155 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 GP6Q9HCN6 339 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 ABCD2Q9UBJ2 740 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 FOXD3Q9UJU5 478 aaPredicted RBP10.11□□□□□ -0.79
SF3B6-201ENST00000233468 TRAPPC4Q9Y296 219 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 NF1P21359 2839 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 EML6Q6ZMW3 1958 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 NINQ8N4C6 2090 aa10.11□□□□□ -0.79
SF3B6-201ENST00000233468 NUP214P35658 2090 aaPredicted RBP10.1□□□□□ -0.79
SF3B6-201ENST00000233468 FAM90A27PA6NNH2 459 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 EFNA2O43921 213 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 TPST1O60507 370 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 ADAM11O75078 769 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 PRKD3O94806 890 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 TOXO94900 526 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 PMS2P2O95744 297 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 TGM6O95932 706 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 GPIP06744 558 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 SNRPBP14678 240 aaKnown RBP10.1□□□□□ -0.79
SF3B6-201ENST00000233468 CPA2P48052 419 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 GSK3BP49841 420 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 SLC35A1P78382 337 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 PLAURQ03405 335 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 DUSP7Q16829 419 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 LRRC23Q53EV4 343 aaPredicted RBP10.1□□□□□ -0.79
SF3B6-201ENST00000233468 ALG10BQ5I7T1 473 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 ZNF613Q6PF04 617 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 FCRLAQ7L513 359 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 GDF7Q7Z4P5 450 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 ARHGAP24Q8N264 748 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 STK35Q8TDR2 534 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 FIG4Q92562 907 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 ZNF775Q96BV0 537 aaPredicted RBP10.1□□□□□ -0.79
SF3B6-201ENST00000233468 TAMM41Q96BW9 452 aa10.1□□□□□ -0.79
SF3B6-201ENST00000233468 SLC47A1Q96FL8 570 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms