RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 STT3BQ8TCJ2 826 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 SLC7A5P2Q9GIP4 190 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 SYNDIG1Q9H7V2 258 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 SMURF1Q9HCE7 757 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 BAIAP2Q9UQB8 552 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 CAB39Q9Y376 341 aaPredicted RBP13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 SIRT4Q9Y6E7 314 aaPredicted RBP13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 A0A075B6Q4 140 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 SLC22A31A6NKX4 558 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 ELOA3DA6NLF2 546 aaPredicted RBP13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 TBX1O43435 398 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 OR7A10O76100 309 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 PNLIPP16233 465 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 GTF2E2P29084 291 aaKnown RBP13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 ZNF117Q03924 483 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 ACSM1Q08AH1 577 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 TRIM16LQ309B1 348 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 ELOA3BQ3SY89 546 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 YOD1Q5VVQ6 348 aaPredicted RBP13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 ARHGAP11AQ6P4F7 1023 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 TUBA3EQ6PEY2 450 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 CD200R1LQ6Q8B3 271 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 MARCH3Q86UD3 253 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 CCDC190Q86UF4 302 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 GHDCQ8N2G8 530 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 ELOA3Q8NG57 546 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 SLC25A46Q96AG3 418 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 IER2Q9BTL4 223 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 HDHD5Q9BXW7 423 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 ADGRL4Q9HBW9 690 aa13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 EXOSC3Q9NQT5 275 aaKnown RBP13.18□□□□□ -0.3
PRKAB1-201ENST00000229328 ASCC3Q8N3C0 2202 aaKnown RBP13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 IGHV5-10-1A0A0J9YXX1 117 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 DAPL1A0PJW8 107 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 DVL2O14641 736 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 TOX3O15405 576 aaPredicted RBP13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 AKAP8O43823 692 aaKnown RBP13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 TSPAN2O60636 221 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 UPK1BO75841 260 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 WISP1O95388 367 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 IL12BP29460 328 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 EGR4Q05215 589 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 HLA-DQA1Q5Y7H0 255 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 PWWP2BQ6NUJ5 590 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 EID2Q8N6I1 236 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 ARIH2OSQ8N7S6 290 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 FAM98AQ8NCA5 519 aaKnown RBP13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 OR51L1Q8NGJ5 315 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 MOSPD2Q8NHP6 518 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 ZNRF4Q8WWF5 429 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 KCTD7Q96MP8 289 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 COPS7AQ9UBW8 275 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 COL5A1P20908 1838 aaPredicted RBP13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 PPM1BO75688 479 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 CFIP05156 583 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 SBK2P0C263 348 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 TGM1P22735 817 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 ABCD3P28288 659 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 TNFSF8P32971 234 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 RPL4P36578 427 aaKnown RBP13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 HCCSP53701 268 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 CAV3P56539 151 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 DCAF7P61962 342 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 ZNF45Q02386 682 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 PLCXD2Q0VAA5 305 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 HNRNPA0Q13151 305 aaKnown RBP13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 TOMM34Q15785 309 aaPredicted RBP13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 C16orf47Q6ZP98 133 aaPredicted RBP13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 MAML2Q8IZL2 1156 aaPredicted RBP13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 PLPP5Q8NEB5 264 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 ATP6V1C2Q8NEY4 427 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 ZPLD1Q8TCW7 415 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 MOGAT1Q96PD6 335 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 GAREM1Q9H706 876 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 PRMT8Q9NR22 394 aaPredicted RBP13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 KLHL1Q9NR64 748 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 MRTO4Q9UKD2 239 aaKnown RBP13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 ZNF337Q9Y3M9 751 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 ADAMTS9Q9P2N4 1935 aa13.17□□□□□ -0.3
PRKAB1-201ENST00000229328 C4orf47A7E2U8 309 aa13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 PATE3B3GLJ2 98 aa13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 E9PI62 339 aa13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 IL1AP01583 271 aa13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 RPS4XP62701 263 aaKnown RBP13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 SQSTM1Q13501 440 aa13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 GALEQ14376 348 aa13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 STEAP3Q658P3 488 aa13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 NCCRP1Q6ZVX7 275 aaPredicted RBP13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 LYSMD2Q8IV50 215 aa13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 RFLNBQ8N5W9 214 aa13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 ZNF441Q8N8Z8 693 aa13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 SMPDL3BQ92485 455 aa13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 OMA1Q96E52 524 aa13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 TBCCD1Q9NVR7 557 aa13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 BABAM2Q9NXR7 383 aa13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 PLEKHB1Q9UF11 243 aaPredicted RBP13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 SRPK3Q9UPE1 567 aa13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 MPDZO75970 2070 aa13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 KHNYNO15037 678 aaKnown RBP13.16□□□□□ -0.3
PRKAB1-201ENST00000229328 TO15178 435 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms