RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 J3QRE1 110 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 PSMD9O00233 223 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 AKR7A3O95154 331 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 ZGLP1P0C6A0 271 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 IFNGR1P15260 489 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 NIPAL3Q6P499 406 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 C11orf88Q6PI97 169 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 FCRLAQ7L513 359 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 MCATQ8IVS2 390 aaKnown RBP13.01□□□□□ -0.33
SF1-201ENST00000227503 DCUN1D3Q8IWE4 304 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 NXPE3Q969Y0 559 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 TSNAXQ99598 290 aaKnown RBP13.01□□□□□ -0.33
SF1-201ENST00000227503 TRMT61BQ9BVS5 477 aaKnown RBP13.01□□□□□ -0.33
SF1-201ENST00000227503 MFFQ9GZY8 342 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 UBQLN3Q9H347 655 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 PELI2Q9HAT8 420 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 SLC23A2Q9UGH3 650 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 PLEKHM1Q9Y4G2 1056 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 VEGFDO43915 354 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 ERAL1O75616 437 aaKnown RBP13.01□□□□□ -0.33
SF1-201ENST00000227503 TMIGD3P0DMS9 266 aaPredicted RBP13.01□□□□□ -0.33
SF1-201ENST00000227503 GAAP10253 952 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 CSF2RAP15509 400 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 PRMT2P55345 433 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 ST8SIA6P61647 398 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 SHC2P98077 582 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 DYRK1AQ13627 763 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 CAMK1Q14012 370 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 ATXN7L3Q14CW9 347 aaPredicted RBP13.01□□□□□ -0.33
SF1-201ENST00000227503 AGERQ15109 404 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 C9orf64Q5T6V5 341 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 ZNF697Q5TEC3 545 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 ZNF626Q68DY1 528 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 ZNF620Q6ZNG0 422 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 UBE3DQ7Z6J8 389 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 FBXO17Q96EF6 278 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 AIF1LQ9BQI0 150 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 DNTTIP1Q9H147 329 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 TMEM138Q9NPI0 162 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 ENTPD4Q9Y227 616 aa13.01□□□□□ -0.33
SF1-201ENST00000227503 OR6C68A6NDL8 312 aa13□□□□□ -0.33
SF1-201ENST00000227503 PRRT4C9JH25 899 aa13□□□□□ -0.33
SF1-201ENST00000227503 CDC123O75794 336 aaPredicted RBP13□□□□□ -0.33
SF1-201ENST00000227503 PCDH8O95206 1070 aa13□□□□□ -0.33
SF1-201ENST00000227503 PPP2R1BP30154 601 aa13□□□□□ -0.33
SF1-201ENST00000227503 PSMB10P40306 273 aa13□□□□□ -0.33
SF1-201ENST00000227503 UBXN2BQ14CS0 331 aa13□□□□□ -0.33
SF1-201ENST00000227503 ZNF311Q5JNZ3 666 aa13□□□□□ -0.33
SF1-201ENST00000227503 LURAP1LQ8IV03 231 aa13□□□□□ -0.33
SF1-201ENST00000227503 OR2T33Q8NG76 320 aa13□□□□□ -0.33
SF1-201ENST00000227503 OR4D10Q8NGI6 311 aa13□□□□□ -0.33
SF1-201ENST00000227503 ING5Q8WYH8 240 aa13□□□□□ -0.33
SF1-201ENST00000227503 TFGQ92734 400 aaPredicted RBP13□□□□□ -0.33
SF1-201ENST00000227503 LCORQ96JN0 433 aaPredicted RBP13□□□□□ -0.33
SF1-201ENST00000227503 NDC1Q9BTX1 674 aa13□□□□□ -0.33
SF1-201ENST00000227503 MENTQ9BUN1 341 aa13□□□□□ -0.33
SF1-201ENST00000227503 SYNDIG1Q9H7V2 258 aa13□□□□□ -0.33
SF1-201ENST00000227503 POT1Q9NUX5 634 aa13□□□□□ -0.33
SF1-201ENST00000227503 COL4A3Q01955 1670 aa13□□□□□ -0.33
SF1-201ENST00000227503 ACOD1A6NK06 481 aa13□□□□□ -0.33
SF1-201ENST00000227503 FLRT2O43155 660 aa13□□□□□ -0.33
SF1-201ENST00000227503 PRAMEF2O60811 474 aa13□□□□□ -0.33
SF1-201ENST00000227503 FKTNO75072 461 aa13□□□□□ -0.33
SF1-201ENST00000227503 ADAM11O75078 769 aa13□□□□□ -0.33
SF1-201ENST00000227503 EIF3GO75821 320 aaKnown RBP eCLIP13□□□□□ -0.33
SF1-201ENST00000227503 ATP1B1P05026 303 aa13□□□□□ -0.33
SF1-201ENST00000227503 PRG2P13727 222 aa13□□□□□ -0.33
SF1-201ENST00000227503 ADRB3P13945 408 aa13□□□□□ -0.33
SF1-201ENST00000227503 IL9P15248 144 aa13□□□□□ -0.33
SF1-201ENST00000227503 PVALBP20472 110 aaPredicted RBP13□□□□□ -0.33
SF1-201ENST00000227503 PSMB5P28074 263 aa13□□□□□ -0.33
SF1-201ENST00000227503 UBE2IP63279 158 aaKnown RBP13□□□□□ -0.33
SF1-201ENST00000227503 REEP5Q00765 189 aa13□□□□□ -0.33
SF1-201ENST00000227503 LRRC37A5PQ49AS3 106 aa13□□□□□ -0.33
SF1-201ENST00000227503 HACD4Q5VWC8 232 aa13□□□□□ -0.33
SF1-201ENST00000227503 FAM98AQ8NCA5 519 aaKnown RBP13□□□□□ -0.33
SF1-201ENST00000227503 FAM71CQ8NEG0 241 aa13□□□□□ -0.33
SF1-201ENST00000227503 TMIEQ8NEW7 156 aa13□□□□□ -0.33
SF1-201ENST00000227503 KISS1RQ969F8 398 aaPredicted RBP13□□□□□ -0.33
SF1-201ENST00000227503 ZNF764Q96H86 408 aaPredicted RBP13□□□□□ -0.33
SF1-201ENST00000227503 MPTX1A8MV57 137 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 H7BY64 318 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 KCNAB3O43448 404 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 SGCEO43556 437 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 ZNF254O75437 659 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 OR2A4O95047 310 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 RASGRP1O95267 797 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 APOC1P02654 83 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 MT-ND5P03915 603 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 HMGN2P05204 90 aaKnown RBP12.99□□□□□ -0.33
SF1-201ENST00000227503 RD3LP0DJH9 198 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 ACRP10323 421 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 ADH5P11766 374 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 PLA2G7Q13093 441 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 TRAM2Q15035 370 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 B3GNTL1Q67FW5 361 aaPredicted RBP12.99□□□□□ -0.33
SF1-201ENST00000227503 PXKQ7Z7A4 578 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 SPICQ8N5J4 248 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 WFIKKN2Q8TEU8 576 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 DOK4Q8TEW6 326 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms