RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 NHLRC3Q5JS37 347 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 SLC22A10Q63ZE4 541 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 SLC25A25Q6KCM7 469 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 APOOLQ6UXV4 268 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 TMPRSS11FQ6ZWK6 438 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 ADGRG3Q86Y34 549 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 FAM98AQ8NCA5 519 aaKnown RBP11.43□□□□□ -0.58
NUP88-201ENST00000225696 SRFBP1Q8NEF9 429 aaKnown RBP11.43□□□□□ -0.58
NUP88-201ENST00000225696 OR52E2Q8NGJ4 325 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 OR4C6Q8NH72 309 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 OTUB2Q96DC9 234 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 SMIM19Q96E16 107 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 DMRTA2Q96SC8 542 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 ZNF350Q9GZX5 532 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 TRPV4Q9HBA0 871 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 MCCC2Q9HCC0 563 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 NOX4Q9NPH5 578 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 PRSS16Q9NQE7 514 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 C2orf42Q9NWW7 574 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 FLRT3Q9NZU0 649 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 ABRACLQ9P1F3 81 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 ZNF346Q9UL40 294 aaKnown RBP11.43□□□□□ -0.58
NUP88-201ENST00000225696 ACSL5Q9ULC5 683 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 COPS3Q9UNS2 423 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 TBC1D3KA0A087X1G2 549 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 TBC1D3BA6NDS4 549 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 TBC1D3FA6NER0 549 aaPredicted RBP11.42□□□□□ -0.58
NUP88-201ENST00000225696 C4orf47A7E2U8 309 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 PRR32B1ATL7 298 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 OGG1O15527 345 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 LDB3O75112 727 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 EML2O95834 649 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 LAMP2P13473 410 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 HIST1H1CP16403 213 aaKnown RBP11.42□□□□□ -0.58
NUP88-201ENST00000225696 PSMB1P20618 241 aaKnown RBP11.42□□□□□ -0.58
NUP88-201ENST00000225696 DCTDP32321 178 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 TAS2R43P59537 309 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 SIRPAP78324 504 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 OC90Q02509 493 aaPredicted RBP11.42□□□□□ -0.58
NUP88-201ENST00000225696 BTN1A1Q13410 526 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 RUNX2Q13950 521 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 DCST2Q5T1A1 773 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 TBC1D3GQ6DHY5 549 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 OR5M10Q6IEU7 315 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 TMEM81Q6P7N7 255 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 FCRLAQ7L513 359 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 ZBTB44Q8NCP5 570 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 TOR1AIP2Q8NFQ8 470 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 OR4E2Q8NGC2 313 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 OR52B4Q8NGK2 314 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 ZPLD1Q8TCW7 415 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 WFIKKN2Q8TEU8 576 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 CNOT9Q92600 299 aaKnown RBP11.42□□□□□ -0.58
NUP88-201ENST00000225696 ELMOD3Q96FG2 381 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 TEX101Q9BY14 249 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 SEMA4CQ9C0C4 833 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 B3GNT4Q9C0J1 378 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 CAPN10Q9HC96 672 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 LYARQ9NX58 379 aaKnown RBP11.42□□□□□ -0.58
NUP88-201ENST00000225696 GNG8Q9UK08 70 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 TBX21Q9UL17 535 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 ADAM18Q9Y3Q7 739 aa11.42□□□□□ -0.58
NUP88-201ENST00000225696 EYSQ5T1H1 3165 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 TRBV2A0A0J9YWF9 115 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 PLSCR5A0PG75 271 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 GXYLT2A0PJZ3 443 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 LGALS8O00214 317 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 P2RX6O15547 441 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 ATP1B1P05026 303 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 NID1P14543 1247 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 NAGAP17050 411 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 RPS4Y1P22090 263 aaKnown RBP11.41□□□□□ -0.58
NUP88-201ENST00000225696 GRPRP30550 384 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 RAB14P61106 215 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 PLA2G7Q13093 441 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 EXOSC7Q15024 291 aaKnown RBP11.41□□□□□ -0.58
NUP88-201ENST00000225696 RPE65Q16518 533 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 C2orf68Q2NKX9 166 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 LINC00303Q3SY05 128 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 AMZ1Q400G9 498 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 ZNF425Q6IV72 752 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 PRSS41Q7RTY9 318 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 ZNF433Q8N7K0 673 aaPredicted RBP11.41□□□□□ -0.58
NUP88-201ENST00000225696 MFSD9Q8NBP5 474 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 UXS1Q8NBZ7 420 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 MOSPD2Q8NHP6 518 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 KRCC1Q9NPI7 259 aaPredicted RBP11.41□□□□□ -0.58
NUP88-201ENST00000225696 NANSQ9NR45 359 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 NTMQ9P121 344 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 MGAT4CQ9UBM8 478 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 FKBP7Q9Y680 259 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 TBC1D3EA0A087X179 549 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 ABHD14A-ACY1A0A1B0GW23 586 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 SELENOFO60613 162 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 SIX6O95475 246 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 TGM6O95932 706 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 ZNF3P17036 446 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 SRMP19623 302 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 DPP4P27487 766 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 PTH2RP49190 550 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms