RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 COL28A1Q2UY09 1125 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 FAM209AQ5JX71 171 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 PRSS41Q7RTY9 318 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 UBE2Q1Q7Z7E8 422 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 ZAR1Q86SH2 424 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 TMEFF1Q8IYR6 380 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 FAM98AQ8NCA5 519 aaKnown RBP12.25□□□□□ -0.45
SRP54-201ENST00000216774 OR4D9Q8NGE8 314 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 OR51Q1Q8NH59 317 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 OR14A16Q8NHC5 309 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 RPLP0P6Q8NHW5 317 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 ZMYND19Q96E35 227 aaPredicted RBP12.25□□□□□ -0.45
SRP54-201ENST00000216774 WDR92Q96MX6 357 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 FBRSQ9HAH7 460 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 CLEC4AQ9UMR7 237 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 MRPS7Q9Y2R9 242 aaKnown RBP12.25□□□□□ -0.45
SRP54-201ENST00000216774 MEIKINA0A087WXM9 373 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 OR6C74A6NCV1 312 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 SYNDIG1LA6NDD5 238 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 TRABD2BA6NFA1 517 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 LEUTXA8MZ59 168 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 K7EQS6 105 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 GALR3O60755 368 aaPredicted RBP12.24□□□□□ -0.45
SRP54-201ENST00000216774 ITGA10O75578 1167 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 SLC22A5O76082 557 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 RAF1P04049 648 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 HIST1H1CP16403 213 aaKnown RBP12.24□□□□□ -0.45
SRP54-201ENST00000216774 CXCL3P19876 107 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 CRYZQ08257 329 aaKnown RBP12.24□□□□□ -0.45
SRP54-201ENST00000216774 RIPPLY1Q0D2K3 151 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 TCEA2Q15560 299 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 ULK3Q6PHR2 472 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 UNQ9370/PRO34162Q6UXP9 181 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 CCDC28AQ8IWP9 274 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 SLC35F2Q8IXU6 374 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 TIGD4Q8IY51 512 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 OR10G6Q8NH81 332 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 CCL4L1Q8NHW4 92 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 SNX33Q8WV41 574 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 PTCHD1Q96NR3 888 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 GSDMCQ9BYG8 508 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 AKAP7Q9P0M2 348 aaPredicted RBP12.24□□□□□ -0.45
SRP54-201ENST00000216774 PCDHGA9Q9Y5G4 932 aaKnown RBP12.24□□□□□ -0.45
SRP54-201ENST00000216774 ENTPD2Q9Y5L3 495 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 COL4A2P08572 1712 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 C5orf42Q9H799 3197 aa12.24□□□□□ -0.45
SRP54-201ENST00000216774 TRBV23OR9-2A0A075B6M9 112 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 A0A0B4J203 849 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 TRBV2A0A0J9YWF9 115 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 LINC00862A6NCI5 91 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 GPR171O14626 319 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 APBB3O95704 486 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 CBX7O95931 251 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 SLC35E2P0CK97 266 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 CCR6P51684 374 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 GPM6BQ13491 265 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 PON3Q15166 354 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 RD3Q7Z3Z2 195 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 ELMOD2Q8IZ81 293 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 CA13Q8N1Q1 262 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 ZNF680Q8NEM1 530 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 SDR9C7Q8NEX9 313 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 OR11H4Q8NGC9 324 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 OR52R1Q8NGF1 315 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 OR4K13Q8NH42 304 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 ZNF671Q8TAW3 534 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 BAHD1Q8TBE0 780 aaPredicted RBP12.23□□□□□ -0.45
SRP54-201ENST00000216774 GIMAP1Q8WWP7 306 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 FAM3CQ92520 227 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 ANKRD9Q96BM1 317 aaPredicted RBP12.23□□□□□ -0.45
SRP54-201ENST00000216774 GABRG3Q99928 467 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 LMF2Q9BU23 707 aaKnown RBP12.23□□□□□ -0.45
SRP54-201ENST00000216774 SLC6A17Q9H1V8 727 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 PLEKHA1Q9HB21 404 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 AUP1Q9Y679 476 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 A0A1W2PPK0 400 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 ADAM11O75078 769 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 MT-ND4P03905 459 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 ANKRD34CP0C6C1 535 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 MYOGP15173 224 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 NTSR1P30989 418 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 DIO1P49895 249 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 EMDP50402 254 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 HCCSP53701 268 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 HSF2Q03933 536 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 GPR18Q14330 331 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 ZNHIT3Q15649 155 aaPredicted RBP12.23□□□□□ -0.45
SRP54-201ENST00000216774 ST3GAL2Q16842 350 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 SLC35D3Q5M8T2 416 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 FAM69AQ5T7M9 428 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 RNF44Q7L0R7 432 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 ZNF550Q7Z398 422 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 SYT9Q86SS6 491 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 ZNF687Q8N1G0 1237 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 ARL14Q8N4G2 192 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 ZNF614Q8N883 585 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 OR5T3Q8NGG3 340 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 LGALS14Q8TCE9 139 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 ARSGQ96EG1 525 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 RADILQ96JH8 1075 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms