RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 SNTA1Q13424 505 aa11.15□□□□□ -0.63
CHPF2-201ENST00000035307 AGERQ15109 404 aa11.15□□□□□ -0.63
CHPF2-201ENST00000035307 GPR32P1Q8NGA4 272 aa11.15□□□□□ -0.63
CHPF2-201ENST00000035307 ZNF431Q8TF32 576 aaPredicted RBP11.15□□□□□ -0.63
CHPF2-201ENST00000035307 NPRL2Q8WTW4 380 aa11.15□□□□□ -0.63
CHPF2-201ENST00000035307 NKX3-1Q99801 234 aaPredicted RBP11.15□□□□□ -0.63
CHPF2-201ENST00000035307 PDCD1LG2Q9BQ51 273 aa11.15□□□□□ -0.63
CHPF2-201ENST00000035307 KATNB1Q9BVA0 655 aa11.15□□□□□ -0.63
CHPF2-201ENST00000035307 SIAEQ9HAT2 523 aa11.15□□□□□ -0.63
CHPF2-201ENST00000035307 HINT3Q9NQE9 182 aaKnown RBP11.15□□□□□ -0.63
CHPF2-201ENST00000035307 GPR55Q9Y2T6 319 aaPredicted RBP11.15□□□□□ -0.63
CHPF2-201ENST00000035307 PTRH2Q9Y3E5 179 aaKnown RBP11.15□□□□□ -0.63
CHPF2-201ENST00000035307 PIEZO2Q9H5I5 2752 aa11.15□□□□□ -0.63
CHPF2-201ENST00000035307 ISPDA4D126 451 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 TRAPPC6AO75865 159 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 NDUFB2O95178 105 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 SERPINA3P01011 423 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 TMEM69Q5SWH9 247 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 PRAMEF20Q5VT98 475 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 IRAK1BP1Q5VVH5 260 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 GLCCI1Q86VQ1 547 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 LYSMD2Q8IV50 215 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 BAHD1Q8TBE0 780 aaPredicted RBP11.14□□□□□ -0.63
CHPF2-201ENST00000035307 TSSK2Q96PF2 358 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 CMKLR1Q99788 373 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 MICU1Q9BPX6 476 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 RXFP3Q9NSD7 469 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 FBXO34Q9NWN3 711 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 CNOT2Q9NZN8 540 aaKnown RBP11.14□□□□□ -0.63
CHPF2-201ENST00000035307 A0A0B4J203 849 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 GDF9O60383 454 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 ACP2P11117 423 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 RPS5P46782 204 aaKnown RBP11.14□□□□□ -0.63
CHPF2-201ENST00000035307 ARFRP1Q13795 201 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 KLHL26Q53HC5 615 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 DYNC2LI1Q8TCX1 351 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 ASB15Q8WXK1 588 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 FKBP10Q96AY3 582 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 PRDM7Q9NQW5 492 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 CCNOP22674 350 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 S100A1P23297 94 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 GDI2P50395 445 aaKnown RBP11.14□□□□□ -0.63
CHPF2-201ENST00000035307 CSRP3P50461 194 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 SCRN3Q0VDG4 424 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 RAB40BQ12829 278 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 SAXO2Q658L1 398 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 ZCCHC12Q6PEW1 402 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 PHC2Q8IXK0 858 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 OR4K17Q8NGC6 315 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 RASD2Q96D21 266 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 G6PC3Q9BUM1 346 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 DEFB126Q9BYW3 111 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 INIPQ9NRY2 104 aa11.14□□□□□ -0.63
CHPF2-201ENST00000035307 TEX13CA0A0J9YWL9 993 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 TMEM72A0PK05 275 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 LMO7DNF2Z398 122 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 I3L521 148 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 FOLR1P15328 257 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 STARP49675 285 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 CCR5P51681 352 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 DUSP2Q05923 314 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 SLX4IPQ5VYV7 408 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 PAQR7Q86WK9 346 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 ASCC1Q8N9N2 400 aaKnown RBP11.13□□□□□ -0.63
CHPF2-201ENST00000035307 OR6N1Q8NGY5 312 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 PPP1R14BQ96C90 147 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 WDR77Q9BQA1 342 aaPredicted RBP11.13□□□□□ -0.63
CHPF2-201ENST00000035307 PRRG4Q9BZD6 226 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 ULBP3Q9BZM4 244 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 C14orf105Q9NVL8 296 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 PRODH2Q9UF12 536 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 SLC6A5Q9Y345 797 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 HRKO00198 91 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 PTTG1O95997 202 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 EMP2P54851 167 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 HSD11B2P80365 405 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 ALG10Q5BKT4 473 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 DMRTC1Q5HYR2 192 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 C3orf38Q5JPI3 329 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 TMEM225Q6GV28 225 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 ARHGAP11AQ6P4F7 1023 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 ZNF836Q6ZNA1 936 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 TMEM99Q8N816 258 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 FAM46BQ96A09 425 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 A4GALTQ9NPC4 353 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 DIABLOQ9NR28 239 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 BABAM2Q9NXR7 383 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 PCDHGB1Q9Y5G3 927 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 MT-ND4P03905 459 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 GLULP15104 373 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 NME1P15531 152 aaKnown RBP11.13□□□□□ -0.63
CHPF2-201ENST00000035307 FAUP35544 74 aaKnown RBP11.13□□□□□ -0.63
CHPF2-201ENST00000035307 NUP62P37198 522 aaPredicted RBP11.13□□□□□ -0.63
CHPF2-201ENST00000035307 FXYD6P3P58550 94 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 MLLT11Q13015 90 aaPredicted RBP11.13□□□□□ -0.63
CHPF2-201ENST00000035307 PRSS53Q2L4Q9 553 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 FAHD1Q6P587 224 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 S100A16Q96FQ6 103 aaKnown RBP11.13□□□□□ -0.63
CHPF2-201ENST00000035307 SENP5Q96HI0 755 aaPredicted RBP11.13□□□□□ -0.63
CHPF2-201ENST00000035307 CTSFQ9UBX1 484 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms