RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 CTPS2Q9NRF8 586 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 KLHL28Q9NXS3 571 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 TRIM33Q9UPN9 1127 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 GPR52Q9Y2T5 361 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 CELSR1Q9NYQ6 3014 aa15.77■□□□□ 0.11
PTPN11-207ENST00000639857 F8P00451 2351 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 SULT2B1O00204 365 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 DNASE1P24855 282 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 IST1P53990 364 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 EXOC3L2Q2M3D2 409 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 ABLIM2Q6H8Q1 611 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 STAC2Q6ZMT1 411 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 ZNF550Q7Z398 422 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 ADGRG3Q86Y34 549 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 TUSC5Q8IXB3 177 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 BBS10Q8TAM1 723 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 TMEM19Q96HH6 336 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 USB1Q9BQ65 265 aaKnown RBP15.76■□□□□ 0.11
PTPN11-207ENST00000639857 HDHD5Q9BXW7 423 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 KLHL4Q9C0H6 718 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 CXXC4Q9H2H0 198 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 MRGBPQ9NV56 204 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 SLC25A37Q9NYZ2 338 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 EMC3Q9P0I2 261 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 ZNF232Q9UNY5 417 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 TRAPPC4Q9Y296 219 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 ZNF443Q9Y2A4 671 aaPredicted RBP15.76■□□□□ 0.11
PTPN11-207ENST00000639857 IFT52Q9Y366 437 aa15.76■□□□□ 0.11
PTPN11-207ENST00000639857 AKAP9Q99996 3911 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 PRRC2AP48634 2157 aaKnown RBP15.75■□□□□ 0.11
PTPN11-207ENST00000639857 RAI1Q7Z5J4 1906 aaPredicted RBP15.75■□□□□ 0.11
PTPN11-207ENST00000639857 TRBV5-3A0A0A0MS03 114 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 A0A1W2PP18 115 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 DEFB108AA8MXU0 73 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 AP3D1O14617 1153 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 CNOT4O95628 575 aaKnown RBP15.75■□□□□ 0.11
PTPN11-207ENST00000639857 RAF1P04049 648 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 TFPIP10646 304 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 ETS2P15036 469 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 ART1P52961 327 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 RASGEF1BQ0VAM2 473 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 AGKQ53H12 422 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 METTL21CQ5VZV1 264 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 ZNF836Q6ZNA1 936 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 MTDHQ86UE4 582 aaKnown RBP15.75■□□□□ 0.11
PTPN11-207ENST00000639857 GABRG1Q8N1C3 465 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 STEAP2Q8NFT2 490 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 TSPEARQ8WU66 669 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 DDIT4LQ96D03 193 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 ALPK1Q96QP1 1244 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 SPATA9Q9BWV2 254 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 C12orf49Q9H741 205 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 OSGIN1Q9UJX0 560 aa15.75■□□□□ 0.11
PTPN11-207ENST00000639857 ING1Q9UK53 422 aaPredicted RBP15.75■□□□□ 0.11
PTPN11-207ENST00000639857 IGKV3D-15A0A087WSY6 115 aa15.74■□□□□ 0.11
PTPN11-207ENST00000639857 TMED7-TICAM2A0A0A6YYA0 188 aa15.74■□□□□ 0.11
PTPN11-207ENST00000639857 FESP07332 822 aa15.74■□□□□ 0.11
PTPN11-207ENST00000639857 TACR3P29371 465 aa15.74■□□□□ 0.11
PTPN11-207ENST00000639857 P2RY6Q15077 328 aa15.74■□□□□ 0.11
PTPN11-207ENST00000639857 VRK2Q86Y07 508 aa15.74■□□□□ 0.11
PTPN11-207ENST00000639857 MSRB3Q8IXL7 192 aa15.74■□□□□ 0.11
PTPN11-207ENST00000639857 PIGXQ8TBF5 258 aa15.74■□□□□ 0.11
PTPN11-207ENST00000639857 ADAM19Q9H013 955 aa15.74■□□□□ 0.11
PTPN11-207ENST00000639857 ZNF385DQ9H6B1 395 aa15.74■□□□□ 0.11
PTPN11-207ENST00000639857 VAPAQ9P0L0 249 aa15.74■□□□□ 0.11
PTPN11-207ENST00000639857 TMEM181Q9P2C4 612 aa15.74■□□□□ 0.11
PTPN11-207ENST00000639857 TMED7Q9Y3B3 224 aa15.74■□□□□ 0.11
PTPN11-207ENST00000639857 MED13LQ71F56 2210 aa15.74■□□□□ 0.11
PTPN11-207ENST00000639857 IGHV3-15A0A0B4J1V0 119 aa15.73■□□□□ 0.11
PTPN11-207ENST00000639857 C5orf58C9J3I9 102 aa15.73■□□□□ 0.11
PTPN11-207ENST00000639857 EIF1BO60739 113 aaKnown RBP15.73■□□□□ 0.11
PTPN11-207ENST00000639857 GCM2O75603 506 aaPredicted RBP15.73■□□□□ 0.11
PTPN11-207ENST00000639857 ARAFP10398 606 aa15.73■□□□□ 0.11
PTPN11-207ENST00000639857 GPX2P18283 190 aa15.73■□□□□ 0.11
PTPN11-207ENST00000639857 OR3A2P47893 321 aa15.73■□□□□ 0.11
PTPN11-207ENST00000639857 SLC16A1P53985 500 aa15.73■□□□□ 0.11
PTPN11-207ENST00000639857 COPZ1P61923 177 aa15.73■□□□□ 0.11
PTPN11-207ENST00000639857 RPS26P11Q5JNZ5 115 aaPredicted RBP15.73■□□□□ 0.11
PTPN11-207ENST00000639857 PAGE3Q5JUK9 113 aa15.73■□□□□ 0.11
PTPN11-207ENST00000639857 GCNT6Q5T4J0 391 aa15.73■□□□□ 0.11
PTPN11-207ENST00000639857 WBP2NLQ6ICG8 309 aa15.73■□□□□ 0.11
PTPN11-207ENST00000639857 SSX8Q7RTT4 187 aa15.73■□□□□ 0.11
PTPN11-207ENST00000639857 NUFIP2Q7Z417 695 aaKnown RBP15.73■□□□□ 0.11
PTPN11-207ENST00000639857 ARL5BQ96KC2 179 aa15.73■□□□□ 0.11
PTPN11-207ENST00000639857 ACTR6Q9GZN1 396 aa15.73■□□□□ 0.11
PTPN11-207ENST00000639857 LIME1Q9H400 295 aa15.73■□□□□ 0.11
PTPN11-207ENST00000639857 TMEM38AQ9H6F2 299 aa15.73■□□□□ 0.11
PTPN11-207ENST00000639857 NPHS2Q9NP85 383 aa15.73■□□□□ 0.11
PTPN11-207ENST00000639857 CCM2LQ9NUG4 571 aaPredicted RBP15.73■□□□□ 0.11
PTPN11-207ENST00000639857 RLIMQ9NVW2 624 aa15.73■□□□□ 0.11
PTPN11-207ENST00000639857 C6orf203Q9P0P8 240 aaPredicted RBP15.73■□□□□ 0.11
PTPN11-207ENST00000639857 LEF1Q9UJU2 399 aaPredicted RBP15.73■□□□□ 0.11
PTPN11-207ENST00000639857 EVPLLA8MZ36 301 aa15.72■□□□□ 0.11
PTPN11-207ENST00000639857 GPR171O14626 319 aa15.72■□□□□ 0.11
PTPN11-207ENST00000639857 SIAH2O43255 324 aa15.72■□□□□ 0.11
PTPN11-207ENST00000639857 ATE1O95260 518 aa15.72■□□□□ 0.11
PTPN11-207ENST00000639857 PGM3O95394 542 aa15.72■□□□□ 0.11
PTPN11-207ENST00000639857 NUDT7P0C024 238 aa15.72■□□□□ 0.11
PTPN11-207ENST00000639857 ACAA2P42765 397 aaKnown RBP15.72■□□□□ 0.11
PTPN11-207ENST00000639857 NR1H2P55055 460 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms