RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 EGFL7Q9UHF1 273 aa7.02□□□□□ -1.29
PNKP-229ENST00000637897 BTNL2Q9UIR0 455 aa7.02□□□□□ -1.29
PNKP-229ENST00000637897 FOXD3Q9UJU5 478 aaPredicted RBP7.02□□□□□ -1.29
PNKP-229ENST00000637897 ICAM5Q9UMF0 924 aa7.02□□□□□ -1.29
PNKP-229ENST00000637897 CLEC4AQ9UMR7 237 aa7.02□□□□□ -1.29
PNKP-229ENST00000637897 CORO2BQ9UQ03 480 aa7.02□□□□□ -1.29
PNKP-229ENST00000637897 PCDHB14Q9Y5E9 798 aa7.02□□□□□ -1.29
PNKP-229ENST00000637897 CSPG4Q6UVK1 2322 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 TCRBV5S2A0A599 114 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 C7orf72A4D263 438 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 SH3D21A4FU49 640 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 SLC22A20A6NK97 555 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 MSTNO14793 375 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 ADAMDEC1O15204 470 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 FCMRO60667 390 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 ADAM11O75078 769 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 ZCCHC18P0CG32 403 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 HOXB9P17482 250 aaPredicted RBP7.01□□□□□ -1.29
PNKP-229ENST00000637897 HOXB4P17483 251 aaPredicted RBP7.01□□□□□ -1.29
PNKP-229ENST00000637897 GGT1P19440 569 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 FASP25445 335 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 HOXC12P31275 282 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 GPC1P35052 558 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 PCYT1AP49585 367 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 CASP9P55211 416 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 SIRPAP78324 504 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 FOXF1Q12946 379 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 MED21Q13503 144 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 SELPLGQ14242 412 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 GANABQ14697 944 aaKnown RBP7.01□□□□□ -1.29
PNKP-229ENST00000637897 MAPK14Q16539 360 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 OR4F3Q6IEY1 312 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 CDC73Q6P1J9 531 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 ZCCHC12Q6PEW1 402 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 SEZ6L2Q6UXD5 910 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 FKBP9P1Q75LS8 142 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 ZNF550Q7Z398 422 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 CALHM3Q86XJ0 350 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 TGIF2LYQ8IUE0 185 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 MSRB3Q8IXL7 192 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 MICU2Q8IYU8 434 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 ADGRG5Q8IZF4 528 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 NATD1Q8N6N6 113 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 PACRGLQ8N7B6 248 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 WFDC11Q8NEX6 87 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 OR10D3Q8NH80 312 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 OR5AK3PQ8NH89 298 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 LRTOMTQ8WZ04 291 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 OR5P2Q8WZ92 322 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 SMPDL3BQ92485 455 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 EME1Q96AY2 570 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 CENPNQ96H22 339 aaPredicted RBP7.01□□□□□ -1.29
PNKP-229ENST00000637897 SH3YL1Q96HL8 342 aaPredicted RBP7.01□□□□□ -1.29
PNKP-229ENST00000637897 REXO5Q96IC2 774 aaKnown RBP7.01□□□□□ -1.29
PNKP-229ENST00000637897 RNF145Q96MT1 663 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 ZNF583Q96ND8 569 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 PANX1Q96RD7 426 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 STACQ99469 402 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 DUSP26Q9BV47 211 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 SPATA9Q9BWV2 254 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 BTBD2Q9BX70 525 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 RSPO3Q9BXY4 272 aaPredicted RBP7.01□□□□□ -1.29
PNKP-229ENST00000637897 BHLHE41Q9C0J9 482 aaPredicted RBP7.01□□□□□ -1.29
PNKP-229ENST00000637897 TMEM185BQ9H7F4 350 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 KAT8Q9H7Z6 458 aaKnown RBP7.01□□□□□ -1.29
PNKP-229ENST00000637897 COQ10BQ9H8M1 238 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 DUSP22Q9NRW4 184 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 ZCCHC3Q9NUD5 404 aaKnown RBP7.01□□□□□ -1.29
PNKP-229ENST00000637897 KLHL28Q9NXS3 571 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 SLC25A37Q9NYZ2 338 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 GMPR2Q9P2T1 348 aaKnown RBP7.01□□□□□ -1.29
PNKP-229ENST00000637897 RAB26Q9ULW5 256 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 AURKCQ9UQB9 309 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 GMEB1Q9Y692 573 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 AP4B1Q9Y6B7 739 aa7.01□□□□□ -1.29
PNKP-229ENST00000637897 ZANQ9Y493 2812 aa7□□□□□ -1.29
PNKP-229ENST00000637897 A0A1W2PQD3 144 aa7□□□□□ -1.29
PNKP-229ENST00000637897 MAGEA13PA6NCF6 341 aa7□□□□□ -1.29
PNKP-229ENST00000637897 TTC36A6NLP5 189 aa7□□□□□ -1.29
PNKP-229ENST00000637897 CLIC1O00299 241 aa7□□□□□ -1.29
PNKP-229ENST00000637897 ETV2O00321 342 aaPredicted RBP7□□□□□ -1.29
PNKP-229ENST00000637897 RNASET2O00584 256 aaKnown RBP7□□□□□ -1.29
PNKP-229ENST00000637897 TNFSF11O14788 317 aa7□□□□□ -1.29
PNKP-229ENST00000637897 KLF4O43474 513 aa7□□□□□ -1.29
PNKP-229ENST00000637897 DENRO43583 198 aaKnown RBP7□□□□□ -1.29
PNKP-229ENST00000637897 NDUFB5O43674 189 aa7□□□□□ -1.29
PNKP-229ENST00000637897 CXCL13O43927 109 aa7□□□□□ -1.29
PNKP-229ENST00000637897 TIPRLO75663 272 aa7□□□□□ -1.29
PNKP-229ENST00000637897 CRHP06850 196 aa7□□□□□ -1.29
PNKP-229ENST00000637897 ALOX5P09917 674 aa7□□□□□ -1.29
PNKP-229ENST00000637897 CD8BP10966 210 aa7□□□□□ -1.29
PNKP-229ENST00000637897 NCK1P16333 377 aa7□□□□□ -1.29
PNKP-229ENST00000637897 ZNF17P17021 662 aa7□□□□□ -1.29
PNKP-229ENST00000637897 GPX2P18283 190 aa7□□□□□ -1.29
PNKP-229ENST00000637897 UGT2B10P36537 528 aa7□□□□□ -1.29
PNKP-229ENST00000637897 CD79BP40259 229 aa7□□□□□ -1.29
PNKP-229ENST00000637897 CCT3P49368 545 aaKnown RBP7□□□□□ -1.29
PNKP-229ENST00000637897 AQP4P55087 323 aa7□□□□□ -1.29
PNKP-229ENST00000637897 POU6F2P78424 691 aaPredicted RBP7□□□□□ -1.29
PNKP-229ENST00000637897 BLMHQ13867 455 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms