RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 GSRP00390 522 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 CDK1P06493 297 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 FBP1P09467 338 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 PPIAL4GP0DN37 164 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 ANXA3P12429 323 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 COX4I1P13073 169 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 GTF2F2P13984 249 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 DAOP14920 347 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 UCHL3P15374 230 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 ZNF23P17027 643 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 NDUFB7P17568 137 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 EPHA3P29320 983 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 LIPAP38571 399 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 MAPK12P53778 367 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 RAB10P61026 200 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 NAA20P61599 178 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 KCNJ2P63252 427 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 FKBP1BP68106 108 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 ELF3P78545 371 aaPredicted RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 FAM3AP98173 230 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 TFAMQ00059 246 aaKnown RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 CDK3Q00526 305 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 GUCY2DQ02846 1103 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 ZP4Q12836 540 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 DLG1Q12959 904 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 NME3Q13232 169 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 SLC39A6Q13433 755 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 TPBGQ13641 420 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 PTGES3Q15185 160 aaKnown RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 PSG5Q15238 335 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 POU2AF1Q16633 256 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 PTGISQ16647 500 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 HAGHQ16775 308 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 ODF4Q2M2E3 257 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 ZNF528Q3MIS6 628 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 WDR72Q3MJ13 1102 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 GGTA1PQ4G0N0 100 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 ZNF658BQ4V348 819 aaPredicted RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 SFT2D3Q587I9 215 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 SPIN3Q5JUX0 258 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 TIMM23BQ5SRD1 257 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 TSTD2Q5T7W7 516 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 LPCAT4Q643R3 524 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 FAM166AQ6J272 317 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 FAM45BPQ6NSW5 357 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 MFSD12Q6NUT3 480 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 ZNF529Q6P280 563 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 HACD2Q6Y1H2 254 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 ZNF517Q6ZMY9 492 aaPredicted RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 MBOAT1Q6ZNC8 495 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 C19orf35Q6ZS72 473 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 G2E3Q7L622 706 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 PEX26Q7Z412 305 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 IRF2BP2Q7Z5L9 587 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 TMED4Q7Z7H5 227 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 PIM3Q86V86 326 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 CHSY1Q86X52 802 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 TMEM25Q86YD3 366 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 GPSM1Q86YR5 675 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 HPS6Q86YV9 775 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 WDFY1Q8IWB7 410 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 GALNT16Q8N428 558 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 LRRC18Q8N456 261 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 D2HGDHQ8N465 521 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 STX19Q8N4C7 294 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 SPEM1Q8N4L4 309 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 MREGQ8N565 214 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 C12orf76Q8N812 135 aaPredicted RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 ZNF738Q8NE65 137 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 MDGA1Q8NFP4 955 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 OR10W1Q8NGF6 305 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 OR4Q3Q8NH05 313 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 OR52I2Q8NH67 350 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 NKD2Q969F2 451 aaPredicted RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 EXOSC8Q96B26 276 aaKnown RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 HAUS1Q96CS2 278 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 RAB39BQ96DA2 213 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 MRPL53Q96EL3 112 aaKnown RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 PELI1Q96FA3 418 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 PDXPQ96GD0 296 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 JSRP1Q96MG2 331 aaPredicted RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 WDR92Q96MX6 357 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 NOL4LQ96MY1 436 aaPredicted RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 GUCD1Q96NT3 240 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 OR2V2Q96R30 315 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 STACQ99469 402 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 PFDN5Q99471 154 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 LGMNQ99538 433 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 TSNAXQ99598 290 aaKnown RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 MRI1Q9BV20 369 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 TMED9Q9BVK6 235 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 ELOVL1Q9BW60 279 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 LRRC2Q9BYS8 371 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 SPRTNQ9H040 489 aaPredicted RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 OR51M1Q9H341 326 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 KIR3DX1Q9H7L2 352 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 DDX31Q9H8H2 851 aaKnown RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 ACTR5Q9H9F9 607 aaPredicted RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 CDH20Q9HBT6 801 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 S100A14Q9HCY8 104 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms