RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 PISDQ9UG56 409 aa13.21□□□□□ -0.29
GABRB3-219ENST00000636466 ADAM29Q9UKF5 820 aa13.21□□□□□ -0.29
GABRB3-219ENST00000636466 MAB21L2Q9Y586 359 aa13.21□□□□□ -0.29
GABRB3-219ENST00000636466 ANKRD28O15084 1053 aa13.21□□□□□ -0.29
GABRB3-219ENST00000636466 SNRPBP14678 240 aaKnown RBP13.21□□□□□ -0.29
GABRB3-219ENST00000636466 APEX1P27695 318 aaKnown RBP13.21□□□□□ -0.29
GABRB3-219ENST00000636466 DUSP5Q16690 384 aa13.21□□□□□ -0.29
GABRB3-219ENST00000636466 RTL10Q7L3V2 364 aa13.21□□□□□ -0.29
GABRB3-219ENST00000636466 ABHD12BQ7Z5M8 362 aaPredicted RBP13.21□□□□□ -0.29
GABRB3-219ENST00000636466 HOXB13Q92826 284 aaPredicted RBP13.21□□□□□ -0.29
GABRB3-219ENST00000636466 MRPL38Q96DV4 380 aaKnown RBP13.21□□□□□ -0.29
GABRB3-219ENST00000636466 NUP50Q9UKX7 468 aa13.21□□□□□ -0.29
GABRB3-219ENST00000636466 ZNF264O43296 627 aa13.21□□□□□ -0.3
GABRB3-219ENST00000636466 PIP5K1CO60331 668 aa13.21□□□□□ -0.3
GABRB3-219ENST00000636466 SRPX2O60687 465 aaPredicted RBP13.21□□□□□ -0.3
GABRB3-219ENST00000636466 GIFP27352 417 aa13.21□□□□□ -0.3
GABRB3-219ENST00000636466 TEAD1P28347 426 aa13.21□□□□□ -0.3
GABRB3-219ENST00000636466 SLC1A3P43003 542 aa13.21□□□□□ -0.3
GABRB3-219ENST00000636466 YPEL5P62699 121 aa13.21□□□□□ -0.3
GABRB3-219ENST00000636466 EEF1A1P68104 462 aaKnown RBP13.21□□□□□ -0.3
GABRB3-219ENST00000636466 COL28A1Q2UY09 1125 aa13.21□□□□□ -0.3
GABRB3-219ENST00000636466 SLC22A6Q4U2R8 563 aa13.21□□□□□ -0.3
GABRB3-219ENST00000636466 MED25Q71SY5 747 aa13.21□□□□□ -0.3
GABRB3-219ENST00000636466 LIMS2Q7Z4I7 341 aa13.21□□□□□ -0.3
GABRB3-219ENST00000636466 PPP1R3BQ86XI6 285 aa13.21□□□□□ -0.3
GABRB3-219ENST00000636466 LAS2Q8IYD9 372 aa13.21□□□□□ -0.3
GABRB3-219ENST00000636466 TBC1D15Q8TC07 691 aa13.21□□□□□ -0.3
GABRB3-219ENST00000636466 SFXN5Q8TD22 340 aa13.21□□□□□ -0.3
GABRB3-219ENST00000636466 DDIT4LQ96D03 193 aa13.21□□□□□ -0.3
GABRB3-219ENST00000636466 LYSMD1Q96S90 227 aa13.21□□□□□ -0.3
GABRB3-219ENST00000636466 RHNO1Q9BSD3 238 aa13.21□□□□□ -0.3
GABRB3-219ENST00000636466 B4GALT7Q9UBV7 327 aa13.21□□□□□ -0.3
GABRB3-219ENST00000636466 GABRPO00591 440 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 HLA-DMAP28067 261 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 SHC1P29353 583 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 TRIM23P36406 574 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 TMEM52BQ4KMG9 183 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 PYHIN1Q6K0P9 492 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 OR10A5Q9H207 317 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 EPHX3Q9H6B9 360 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 CPNE5Q9HCH3 593 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 ZNF226Q9NYT6 803 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 TGFBR1P36897 503 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 SLC26A5P58743 744 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 EIF5AP63241 154 aaKnown RBP13.2□□□□□ -0.3
GABRB3-219ENST00000636466 PTCRAQ6ISU1 281 aaPredicted RBP13.2□□□□□ -0.3
GABRB3-219ENST00000636466 MFSD12Q6NUT3 480 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 Q6ZNB5 142 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 PRICKLE2Q7Z3G6 844 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 EID2BQ96D98 161 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 MS4A6EQ96DS6 147 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 SENP5Q96HI0 755 aaPredicted RBP13.2□□□□□ -0.3
GABRB3-219ENST00000636466 VN1R3Q9BXE9 311 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 ELOVL3Q9HB03 270 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 ANKRD10Q9NXR5 420 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 ZNF225Q9UK10 706 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 WDR37Q9Y2I8 494 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 RHBDD3Q9Y3P4 386 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 ARPC1BO15143 372 aaKnown RBP13.2□□□□□ -0.3
GABRB3-219ENST00000636466 ARPC5O15511 151 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 CRTAPO75718 401 aaPredicted RBP13.2□□□□□ -0.3
GABRB3-219ENST00000636466 HTR3BO95264 441 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 SMIM18P0DKX4 95 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 HOXA9P31269 272 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 ISL1P61371 349 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 ADPRMQ3LIE5 342 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 TMEM176BQ3YBM2 270 aaPredicted RBP13.2□□□□□ -0.3
GABRB3-219ENST00000636466 LRIF1Q5T3J3 769 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 SLC6A19Q695T7 634 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 GHSRQ92847 366 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 NAA11Q9BSU3 229 aaPredicted RBP13.2□□□□□ -0.3
GABRB3-219ENST00000636466 WSB2Q9NYS7 404 aaPredicted RBP13.2□□□□□ -0.3
GABRB3-219ENST00000636466 MLXQ9UH92 298 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 MGAT4AQ9UM21 535 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 SPTBP11277 2137 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 KIAA1217Q5T5P2 1943 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 M0R036 132 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 NUDT21O43809 227 aaKnown RBP13.2□□□□□ -0.3
GABRB3-219ENST00000636466 CHRM4P08173 479 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 MSX1P28360 303 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 FXYD4P59646 89 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 MLLT11Q13015 90 aaPredicted RBP13.2□□□□□ -0.3
GABRB3-219ENST00000636466 TDGQ13569 410 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 PDE7AQ13946 482 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 CTU2Q2VPK5 515 aaKnown RBP13.2□□□□□ -0.3
GABRB3-219ENST00000636466 PYCR3Q53H96 274 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 TMEM205Q6UW68 189 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 FCRLAQ7L513 359 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 RADILQ96JH8 1075 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 BMFQ96LC9 184 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 SLC6A13Q9NSD5 602 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 KCNS2Q9ULS6 477 aa13.2□□□□□ -0.3
GABRB3-219ENST00000636466 UNC13CQ8NB66 2214 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 LOXHD1Q8IVV2 1947 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 TMEM269A0A1B0GVZ9 245 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 SCRG1O75711 98 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 MT-ND4P03905 459 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 ADARB1P78563 741 aaKnown RBP13.19□□□□□ -0.3
GABRB3-219ENST00000636466 ILKQ13418 452 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 EIF5AL1Q6IS14 154 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms