RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 CRMP1Q14194 572 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 HLXQ14774 488 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 ADAMTSL4Q6UY14 1074 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 ERN2Q76MJ5 926 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 SYT9Q86SS6 491 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 SLC16A11Q8NCK7 471 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 TMIEQ8NEW7 156 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 OR2A1Q8NGT9 310 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 OR10Z1Q8NGY1 313 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 OR2T27Q8NH04 317 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 PFN4Q8NHR9 129 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 THEM6Q8WUY1 208 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 CDS1Q92903 461 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 BPIFA2Q96DR5 249 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 MRPL48Q96GC5 212 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 ORAI3Q9BRQ5 295 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 MED31Q9Y3C7 131 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 IGKV1-8A0A0C4DH67 115 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 AIPO00170 330 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 GPRIN2O60269 458 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 FMO6PO60774 539 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 HIST1H2ABP04908 130 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 RAB40ALP0C0E4 278 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 FUT1P19526 365 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 PTNP21246 168 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 NOS3P29474 1203 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 DLX5P56178 289 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 OR1Q1Q15612 314 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 TMEM52BQ4KMG9 183 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 FAM199XQ6PEV8 388 aaPredicted RBP13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 UNQ9370/PRO34162Q6UXP9 181 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 THSD4Q6ZMP0 1018 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 HIST3H2AQ7L7L0 130 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 NRROSQ86YC3 692 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 BVESQ8NE79 360 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 WFIKKN2Q8TEU8 576 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 RAB40AQ8WXH6 277 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 PIGKQ92643 395 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 HIST1H2ACQ93077 130 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 ARRDC3Q96B67 414 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 OTUB2Q96DC9 234 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 S100A16Q96FQ6 103 aaKnown RBP13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 CXorf58Q96LI9 332 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 SLC7A5P2Q9GIP4 190 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 CA10Q9NS85 328 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 C20orf141Q9NUB4 165 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 TAS2R10Q9NYW0 307 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 A0A1B0GW55 424 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 A0A1W2PS29 197 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 SUSD5O60279 629 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 LILRB3O75022 631 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 DUX4L2P0CJ85 424 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 DUX4L3P0CJ86 424 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 DUX4L4P0CJ87 422 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 DUX4L5P0CJ88 424 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 DUX4L6P0CJ89 424 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 DUX4L7P0CJ90 424 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 ADRB3P13945 408 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 NDUFS1P28331 727 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 TP53I3Q53FA7 332 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 TMEM255AQ5JRV8 349 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 ARHGAP11AQ6P4F7 1023 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 ZC3H14Q6PJT7 736 aaKnown RBP13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 CFAP77Q6ZQR2 320 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 SAMD14Q8IZD0 417 aaPredicted RBP13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 POMGNT2Q8NAT1 580 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 OR52H1Q8NGJ2 320 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 OR13C2Q8NGS9 318 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 COQ8AQ8NI60 647 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 PELI1Q96FA3 418 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 LRFN5Q96NI6 719 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 FERD3LQ96RJ6 166 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 RAB11FIP5Q9BXF6 653 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 C1QTNF6Q9BXI9 259 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 SLC6A15Q9H2J7 730 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 DUX4Q9UBX2 424 aa13.68□□□□□ -0.22
CACNA1A-220ENST00000635988 TRBV2A0A0J9YWF9 115 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 UBE2QL1A1L167 161 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 IFITM5A6NNB3 132 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 C4orf51C9J302 202 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 NDUFB6O95139 128 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 LDOC1O95751 146 aaPredicted RBP13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 DBIP07108 87 aaKnown RBP13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 LAMP2P13473 410 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 ICAM2P13598 275 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 SDHBP21912 280 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 CERS1P27544 350 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 RAB28P51157 221 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 METAP1P53582 386 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 RPS11P62280 158 aaKnown RBP eCLIP13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 AMZ1Q400G9 498 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 WDR88Q6ZMY6 472 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 TMUB2Q71RG4 321 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 SSX6Q7RTT6 188 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 PDZD9Q8IXQ8 264 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 OR8D1Q8WZ84 308 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 PAWRQ96IZ0 340 aaKnown RBP13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 OR14A2Q96R54 314 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 MRPS30Q9NP92 439 aaKnown RBP13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 ACOT7O00154 380 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms