RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 ZNF559Q9BR84 538 aa13.9□□□□□ -0.18
CLN6-211ENST00000635754 ADAM19Q9H013 955 aa13.9□□□□□ -0.18
CLN6-211ENST00000635754 TMEM181Q9P2C4 612 aa13.9□□□□□ -0.18
CLN6-211ENST00000635754 BAG5Q9UL15 447 aa13.9□□□□□ -0.18
CLN6-211ENST00000635754 MCTS1Q9ULC4 181 aaKnown RBP13.9□□□□□ -0.18
CLN6-211ENST00000635754 TMED7Q9Y3B3 224 aa13.9□□□□□ -0.18
CLN6-211ENST00000635754 PTPN13Q12923 2485 aa13.9□□□□□ -0.18
CLN6-211ENST00000635754 CXCR6O00574 342 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 SYNGR4O95473 234 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 CLDN14O95500 239 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 LGI1O95970 557 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 TFPIP10646 304 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 CCNA2P20248 432 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 CD247P20963 164 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 CXCR1P25024 350 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 MAP2K6P52564 334 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 CRYBA2P53672 197 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 CARD18P57730 90 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 SLC25A3Q00325 362 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 NRF1Q16656 503 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 OR2A2Q6IF42 318 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 TRPM8Q7Z2W7 1104 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 NAXEQ8NCW5 288 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 OR52E4Q8NGH9 312 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 FNDC9Q8TBE3 224 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 FIG4Q92562 907 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 PROX1Q92786 737 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 OSTF1Q92882 214 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 CPNE4Q96A23 557 aaPredicted RBP13.9□□□□□ -0.19
CLN6-211ENST00000635754 DDIT4LQ96D03 193 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 OR5B2Q96R09 309 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 ARHGDIGQ99819 225 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 PRRG4Q9BZD6 226 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 TRIM2Q9C040 744 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 COQ10BQ9H8M1 238 aa13.9□□□□□ -0.19
CLN6-211ENST00000635754 GMPR2Q9P2T1 348 aaKnown RBP13.9□□□□□ -0.19
CLN6-211ENST00000635754 MED12LQ86YW9 2145 aa13.89□□□□□ -0.19
CLN6-211ENST00000635754 COL12A1Q99715 3063 aa13.89□□□□□ -0.19
CLN6-211ENST00000635754 UTP20O75691 2785 aaKnown RBP13.89□□□□□ -0.19
CLN6-211ENST00000635754 A0A1W2PNR3 127 aa13.89□□□□□ -0.19
CLN6-211ENST00000635754 A1L4Q6 167 aa13.89□□□□□ -0.19
CLN6-211ENST00000635754 B2RBV5 119 aa13.89□□□□□ -0.19
CLN6-211ENST00000635754 M0R3H8 397 aa13.89□□□□□ -0.19
CLN6-211ENST00000635754 DVL2O14641 736 aa13.89□□□□□ -0.19
CLN6-211ENST00000635754 ZNF208O43345 1280 aa13.89□□□□□ -0.19
CLN6-211ENST00000635754 RCBTB2O95199 551 aa13.89□□□□□ -0.19
CLN6-211ENST00000635754 TGM6O95932 706 aa13.89□□□□□ -0.19
CLN6-211ENST00000635754 FESP07332 822 aa13.89□□□□□ -0.19
CLN6-211ENST00000635754 TMIGD3P0DMS9 266 aaPredicted RBP13.89□□□□□ -0.19
CLN6-211ENST00000635754 KDELR2P33947 212 aa13.89□□□□□ -0.19
CLN6-211ENST00000635754 CLK1P49759 484 aaKnown RBP13.89□□□□□ -0.19
CLN6-211ENST00000635754 DEFB107AQ8IZN7 70 aa13.89□□□□□ -0.19
CLN6-211ENST00000635754 LSMEM1Q8N8F7 131 aa13.89□□□□□ -0.19
CLN6-211ENST00000635754 VANGL1Q8TAA9 524 aaPredicted RBP13.89□□□□□ -0.19
CLN6-211ENST00000635754 C3orf49Q96BT1 292 aa13.89□□□□□ -0.19
CLN6-211ENST00000635754 SLC9A8Q9Y2E8 581 aa13.89□□□□□ -0.19
CLN6-211ENST00000635754 CACNA1CQ13936 2221 aa13.88□□□□□ -0.19
CLN6-211ENST00000635754 TMEM72A0PK05 275 aa13.88□□□□□ -0.19
CLN6-211ENST00000635754 CTSSP25774 331 aa13.88□□□□□ -0.19
CLN6-211ENST00000635754 HTR2AP28223 471 aa13.88□□□□□ -0.19
CLN6-211ENST00000635754 CSNK2A1P68400 391 aaPredicted RBP13.88□□□□□ -0.19
CLN6-211ENST00000635754 CYBRD1Q53TN4 286 aa13.88□□□□□ -0.19
CLN6-211ENST00000635754 SAMD4BQ5PRF9 694 aaKnown RBP13.88□□□□□ -0.19
CLN6-211ENST00000635754 GCNT2Q8N0V5 402 aa13.88□□□□□ -0.19
CLN6-211ENST00000635754 RNF148Q8N7C7 305 aa13.88□□□□□ -0.19
CLN6-211ENST00000635754 LILRB4Q8NHJ6 448 aa13.88□□□□□ -0.19
CLN6-211ENST00000635754 DNAJA4Q8WW22 397 aaPredicted RBP13.88□□□□□ -0.19
CLN6-211ENST00000635754 LZICQ8WZA0 190 aa13.88□□□□□ -0.19
CLN6-211ENST00000635754 INTS12Q96CB8 462 aaKnown RBP13.88□□□□□ -0.19
CLN6-211ENST00000635754 PSMG3-AS1Q96PY0 264 aa13.88□□□□□ -0.19
CLN6-211ENST00000635754 OR11A1Q9GZK7 315 aa13.88□□□□□ -0.19
CLN6-211ENST00000635754 TMEM27Q9HBJ8 222 aa13.88□□□□□ -0.19
CLN6-211ENST00000635754 ADPRHL2Q9NX46 363 aa13.88□□□□□ -0.19
CLN6-211ENST00000635754 SELENONQ9NZV5 590 aa13.88□□□□□ -0.19
CLN6-211ENST00000635754 ZNF629Q9UEG4 869 aaPredicted RBP13.88□□□□□ -0.19
CLN6-211ENST00000635754 HDGFL3Q9Y3E1 203 aa13.88□□□□□ -0.19
CLN6-211ENST00000635754 A0A1B0GWA3 101 aa13.87□□□□□ -0.19
CLN6-211ENST00000635754 ELOA3DA6NLF2 546 aaPredicted RBP13.87□□□□□ -0.19
CLN6-211ENST00000635754 FAM90A27PA6NNH2 459 aa13.87□□□□□ -0.19
CLN6-211ENST00000635754 SULT2B1O00204 365 aa13.87□□□□□ -0.19
CLN6-211ENST00000635754 FMO6PO60774 539 aa13.87□□□□□ -0.19
CLN6-211ENST00000635754 GMNNO75496 209 aa13.87□□□□□ -0.19
CLN6-211ENST00000635754 HSD17B1P14061 328 aa13.87□□□□□ -0.19
CLN6-211ENST00000635754 GGT1P19440 569 aa13.87□□□□□ -0.19
CLN6-211ENST00000635754 BMP5P22003 454 aa13.87□□□□□ -0.19
CLN6-211ENST00000635754 HTR1EP28566 365 aa13.87□□□□□ -0.19
CLN6-211ENST00000635754 OPRM1P35372 400 aa13.87□□□□□ -0.19
CLN6-211ENST00000635754 DIO1P49895 249 aa13.87□□□□□ -0.19
CLN6-211ENST00000635754 RAC3P60763 192 aa13.87□□□□□ -0.19
CLN6-211ENST00000635754 MYBPHQ13203 477 aa13.87□□□□□ -0.19
CLN6-211ENST00000635754 CDSNQ15517 529 aa13.87□□□□□ -0.19
CLN6-211ENST00000635754 ZNF239Q16600 458 aaKnown RBP13.87□□□□□ -0.19
CLN6-211ENST00000635754 ELOA3BQ3SY89 546 aa13.87□□□□□ -0.19
CLN6-211ENST00000635754 ALG10BQ5I7T1 473 aa13.87□□□□□ -0.19
CLN6-211ENST00000635754 ULK3Q6PHR2 472 aa13.87□□□□□ -0.19
CLN6-211ENST00000635754 TMPPEQ6ZT21 453 aa13.87□□□□□ -0.19
CLN6-211ENST00000635754 MAMDC2Q7Z304 686 aaPredicted RBP13.87□□□□□ -0.19
CLN6-211ENST00000635754 ATG4DQ86TL0 474 aaPredicted RBP13.87□□□□□ -0.19
CLN6-211ENST00000635754 RBM15BQ8NDT2 890 aaKnown RBP13.87□□□□□ -0.19
CLN6-211ENST00000635754 ELOA3Q8NG57 546 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms