RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 M1APQ8TC57 530 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 FNDC8Q8TC99 324 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 DOK4Q8TEW6 326 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 RAB2BQ8WUD1 216 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 LZICQ8WZA0 190 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 C14orf79Q96F83 325 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 JSRP1Q96MG2 331 aaPredicted RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 CSF3RQ99062 836 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 CNPPD1Q9BV87 410 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 EBPLQ9BY08 206 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 ENKD1Q9H0I2 346 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 HPF1Q9NWY4 346 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 SIRT5Q9NXA8 310 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 BTNL2Q9UIR0 455 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 HSPE1-MOB4S4R3N1 261 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 HRNRQ86YZ3 2850 aaPredicted RBP4.41□□□□□ -1.7
LINC00550-201ENST00000629293 PRR14LQ5THK1 2151 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 SH3PXD2BA1X283 911 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 MAGEB17A8MXT2 336 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 F2RL2O00254 374 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 CLIC1O00299 241 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 LRATO95237 230 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 ETHE1O95571 254 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 IGLV1-40P01703 118 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 FOSL1P15407 271 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 TNNI3P19429 210 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 AGAP20933 346 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 PLA2G16P53816 162 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 RHAGQ02094 409 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 ID2Q02363 134 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 IRF8Q02556 426 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 VEZF1Q14119 521 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 KEAP1Q14145 624 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 GXYLT1Q4G148 440 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 OR2T5Q6IEZ7 315 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 PGBD2Q6P3X8 592 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 CBLL1Q75N03 491 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 EIF3MQ7L2H7 374 aaKnown RBP4.41□□□□□ -1.7
LINC00550-201ENST00000629293 DTX3Q8N9I9 347 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 PIK3C3Q8NEB9 887 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 OR2T29Q8NH02 315 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 FAM57AQ8TBR7 257 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 ASB5Q8WWX0 329 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 ATL1Q8WXF7 558 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 TP53INP1Q96A56 240 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 COQ8BQ96D53 544 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 WDR34Q96EX3 536 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 NRBF2Q96F24 287 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 PITX2Q99697 317 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 SMR3AQ99954 134 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 DCUN1D5Q9BTE7 237 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 C1orf43Q9BWL3 253 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 OR8D2Q9GZM6 311 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 VPS29Q9UBQ0 182 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 BLOC1S6Q9UL45 172 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 ZNF835Q9Y2P0 537 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 FAM171A2A8MVW0 826 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 GNGT2O14610 69 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 BCKDKO14874 412 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 MITFO75030 526 aaPredicted RBP4.41□□□□□ -1.7
LINC00550-201ENST00000629293 OR2J2O76002 312 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 HPXP02790 462 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 ITGA5P08648 1049 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 LAMP1P11279 417 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 CCNA2P20248 432 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 FPR1P21462 350 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 BMP5P22003 454 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 PRKACGP22612 351 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 IGFBP5P24593 272 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 KDELR2P33947 212 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 CLK3P49761 638 aaKnown RBP4.41□□□□□ -1.7
LINC00550-201ENST00000629293 DAPP51397 102 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 CCR8P51685 355 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 RAD23AP54725 363 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 GP2P55259 537 aaKnown RBP4.41□□□□□ -1.7
LINC00550-201ENST00000629293 ERVFRD-1P60508 538 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 BTN3A2P78410 334 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 VLDLRP98155 873 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 PPP1R8Q12972 351 aaKnown RBP4.41□□□□□ -1.7
LINC00550-201ENST00000629293 GAB1Q13480 694 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 MZT2BQ6NZ67 158 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 FAHD1Q6P587 224 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 Q6ZNX1 250 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 MOGAT3Q86VF5 341 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 CLECL1Q8IZS7 167 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 TBC1D19Q8N5T2 526 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 ATG16L2Q8NAA4 619 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 LILRB4Q8NHJ6 448 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 GOT1L1Q8NHS2 421 aaPredicted RBP4.41□□□□□ -1.7
LINC00550-201ENST00000629293 SCMH1Q96GD3 660 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 SIGLEC11Q96RL6 698 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 TP63Q9H3D4 680 aaPredicted RBP4.41□□□□□ -1.7
LINC00550-201ENST00000629293 NECTIN3Q9NQS3 549 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 LANCL2Q9NS86 450 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 ENPP5Q9UJA9 477 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 EXO1Q9UQ84 846 aaKnown RBP4.41□□□□□ -1.7
LINC00550-201ENST00000629293 KLK4Q9Y5K2 254 aa4.41□□□□□ -1.7
LINC00550-201ENST00000629293 NUP210LQ5VU65 1888 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 A0A0G2JMM0 328 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 A0A1W2PPB8 328 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms