RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 DUSP3P51452 185 aaPredicted RBP20.18■□□□□ 0.82
PNKP-220ENST00000627232 DCDP81605 110 aaKnown RBP20.18■□□□□ 0.82
PNKP-220ENST00000627232 TUBA3EQ6PEY2 450 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 NUP54Q7Z3B4 507 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 LHFPL3Q86UP9 236 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 PRR22Q8IZ63 422 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 SIRT6Q8N6T7 355 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 SLC38A9Q8NBW4 561 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 IFI44Q8TCB0 444 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 KISS1RQ969F8 398 aaPredicted RBP20.18■□□□□ 0.82
PNKP-220ENST00000627232 TP53INP1Q96A56 240 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 NACC2Q96BF6 587 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 OMA1Q96E52 524 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 SECISBP2Q96T21 854 aaKnown RBP20.18■□□□□ 0.82
PNKP-220ENST00000627232 ASPNQ9BXN1 380 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 SEMA4CQ9C0C4 833 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 NRSN2Q9GZP1 204 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 MED20Q9H944 212 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 HAO2Q9NYQ3 351 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 CHRNA9Q9UGM1 479 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 FBXO4Q9UKT5 387 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 CAB39Q9Y376 341 aaPredicted RBP20.18■□□□□ 0.82
PNKP-220ENST00000627232 IGKV1D-42A0A075B6H8 117 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 TIAF1O95411 115 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 HEXBP07686 556 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 CCR4P51679 360 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 ISXQ2M1V0 245 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 ZNF385CQ66K41 422 aaPredicted RBP20.17■□□□□ 0.82
PNKP-220ENST00000627232 PWWP2BQ6NUJ5 590 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 CBLN3Q6UW01 205 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 DPY19L2P2Q6ZN68 376 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 OVCH1Q7RTY7 1134 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 ANKRD37Q7Z713 158 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 ACBD7Q8N6N7 88 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 OR51G2Q8NGK0 314 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 HCAR1Q9BXC0 346 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 SYNDIG1Q9H7V2 258 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 PPIEQ9UNP9 301 aaKnown RBP20.17■□□□□ 0.82
PNKP-220ENST00000627232 SF3B6Q9Y3B4 125 aaKnown RBP20.17■□□□□ 0.82
PNKP-220ENST00000627232 PEX16Q9Y5Y5 336 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 A0A075B6Q4 140 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 TAF4O00268 1085 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 WWP2O00308 870 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 AKAP8O43823 692 aaKnown RBP20.17■□□□□ 0.82
PNKP-220ENST00000627232 NOS3P29474 1203 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 PRPS1P60891 318 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 RPS4XP62701 263 aaKnown RBP20.17■□□□□ 0.82
PNKP-220ENST00000627232 BDH1Q02338 343 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 CRMP1Q14194 572 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 SLC23A3Q6PIS1 610 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 TMPRSS11AQ6ZMR5 421 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 Q6ZNX1 250 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 LSRQ86X29 649 aaPredicted RBP20.17■□□□□ 0.82
PNKP-220ENST00000627232 OR5M3Q8NGP4 307 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 ERMAPQ96PL5 475 aaPredicted RBP20.17■□□□□ 0.82
PNKP-220ENST00000627232 TEAD3Q99594 435 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 ADAM19Q9H013 955 aa20.17■□□□□ 0.82
PNKP-220ENST00000627232 SAGE2PA6NJ88 616 aa20.16■□□□□ 0.82
PNKP-220ENST00000627232 VSTM2BA6NLU5 285 aa20.16■□□□□ 0.82
PNKP-220ENST00000627232 IDSB3KWA1 339 aa20.16■□□□□ 0.82
PNKP-220ENST00000627232 SLC30A4O14863 429 aa20.16■□□□□ 0.82
PNKP-220ENST00000627232 IDH3BO43837 385 aa20.16■□□□□ 0.82
PNKP-220ENST00000627232 ALOX12BO75342 701 aa20.16■□□□□ 0.82
PNKP-220ENST00000627232 CYC1P08574 325 aa20.16■□□□□ 0.82
PNKP-220ENST00000627232 ABCD3P28288 659 aa20.16■□□□□ 0.82
PNKP-220ENST00000627232 GABRA5P31644 462 aa20.16■□□□□ 0.82
PNKP-220ENST00000627232 S100A5P33763 92 aa20.16■□□□□ 0.82
PNKP-220ENST00000627232 DAB2P98082 770 aa20.16■□□□□ 0.82
PNKP-220ENST00000627232 ZNF117Q03924 483 aa20.16■□□□□ 0.82
PNKP-220ENST00000627232 POU4F2Q12837 409 aa20.16■□□□□ 0.82
PNKP-220ENST00000627232 KLHL12Q53G59 568 aa20.16■□□□□ 0.82
PNKP-220ENST00000627232 PPP1R3BQ86XI6 285 aa20.16■□□□□ 0.82
PNKP-220ENST00000627232 NFAM1Q8NET5 270 aaPredicted RBP20.16■□□□□ 0.82
PNKP-220ENST00000627232 GPX7Q96SL4 187 aaPredicted RBP20.16■□□□□ 0.82
PNKP-220ENST00000627232 TXNL4BQ9NX01 149 aaKnown RBP20.16■□□□□ 0.82
PNKP-220ENST00000627232 CDC14CA4D256 554 aa20.15■□□□□ 0.82
PNKP-220ENST00000627232 ARPC3O15145 178 aa20.15■□□□□ 0.82
PNKP-220ENST00000627232 NDUFB5O43674 189 aa20.15■□□□□ 0.82
PNKP-220ENST00000627232 CD40LGP29965 261 aa20.15■□□□□ 0.82
PNKP-220ENST00000627232 CD79BP40259 229 aa20.15■□□□□ 0.82
PNKP-220ENST00000627232 RNF4P78317 190 aa20.15■□□□□ 0.82
PNKP-220ENST00000627232 FAAH2Q6GMR7 532 aa20.15■□□□□ 0.82
PNKP-220ENST00000627232 ZNF322Q6U7Q0 402 aaPredicted RBP20.15■□□□□ 0.82
PNKP-220ENST00000627232 SHISA6Q6ZSJ9 500 aa20.15■□□□□ 0.82
PNKP-220ENST00000627232 ZNF563Q8TA94 476 aa20.15■□□□□ 0.82
PNKP-220ENST00000627232 SPRYD4Q8WW59 207 aaPredicted RBP20.15■□□□□ 0.82
PNKP-220ENST00000627232 METTL21AQ8WXB1 218 aa20.15■□□□□ 0.82
PNKP-220ENST00000627232 TRMT61AQ96FX7 289 aaKnown RBP20.15■□□□□ 0.82
PNKP-220ENST00000627232 GFM1Q96RP9 751 aaKnown RBP20.15■□□□□ 0.82
PNKP-220ENST00000627232 COQ7Q99807 217 aa20.15■□□□□ 0.82
PNKP-220ENST00000627232 TBL1XR1Q9BZK7 514 aa20.15■□□□□ 0.82
PNKP-220ENST00000627232 C6orf62Q9GZU0 229 aaPredicted RBP20.15■□□□□ 0.82
PNKP-220ENST00000627232 OR6C70A6NIJ9 312 aa20.14■□□□□ 0.81
PNKP-220ENST00000627232 C12orf71A8MTZ7 269 aa20.14■□□□□ 0.81
PNKP-220ENST00000627232 PATE3B3GLJ2 98 aa20.14■□□□□ 0.81
PNKP-220ENST00000627232 MCIDASD6RGH6 385 aa20.14■□□□□ 0.81
PNKP-220ENST00000627232 PLD2O14939 933 aa20.14■□□□□ 0.81
PNKP-220ENST00000627232 SYPP08247 313 aa20.14■□□□□ 0.81
PNKP-220ENST00000627232 FGF5P12034 268 aa20.14■□□□□ 0.81
PNKP-220ENST00000627232 MST1P26927 711 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms