RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 MARVELD2Q8N4S9 558 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 CNEP1R1Q8N9A8 125 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 SMYD1Q8NB12 490 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 CLEC18CQ8NCF0 446 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 BHLHE22Q8NFJ8 381 aaPredicted RBP6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 TNIP2Q8NFZ5 429 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 OR2T12Q8NG77 320 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 OR10D3Q8NH80 312 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 OR2V1Q8NHB1 315 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 ZPLD1Q8TCW7 415 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 SLC25A43Q8WUT9 341 aaPredicted RBP6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 PROX1Q92786 737 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 INTS12Q96CB8 462 aaKnown RBP6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 ZHX1-C8orf76Q96EF9 292 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 CCT8L2Q96SF2 557 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 CCDC106Q9BWC9 280 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 C7orf69Q9H7B7 122 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 KAT8Q9H7Z6 458 aaKnown RBP6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 CALHM2Q9HA72 323 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 BCL2L10Q9HD36 194 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 KCNJ16Q9NPI9 418 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 ACER3Q9NUN7 267 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 ADA2Q9NZK5 511 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 C6orf203Q9P0P8 240 aaPredicted RBP6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 Q9UFV3 132 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 CHRNA9Q9UGM1 479 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 AP3M1Q9Y2T2 418 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 FREM3P0C091 2139 aa6.5□□□□□ -1.37
NPLOC4-221ENST00000625705 ZFHX4Q86UP3 3567 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 TMED7-TICAM2A0A0A6YYA0 188 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 NKX2-6A6NCS4 301 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 MBD3L4A6NDZ8 208 aaPredicted RBP6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 MBD3L3A6NE82 208 aaPredicted RBP6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 MBD3L5A6NJ08 208 aaPredicted RBP6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 CCT8L1PA6NM43 557 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 FAM220BPB1ANY3 271 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 H0YC42 278 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 FXYD1O00168 92 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 FRS3O43559 492 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 BCAS1O75363 584 aaPredicted RBP6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 HTR1EP28566 365 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 GTF2E2P29084 291 aaKnown RBP6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 TACR3P29371 465 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 PRKAR1BP31321 381 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 UQCRC1P31930 480 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 OPRM1P35372 400 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 TIMP3P35625 211 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 CPOXP36551 454 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 APOBEC1P41238 236 aaKnown RBP6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 MNAT1P51948 309 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 SLC7A2P52569 658 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 SUCLG1P53597 346 aaKnown RBP6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 TPD52P55327 224 aaPredicted RBP6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 EEF1A1P68104 462 aaKnown RBP6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 CSNK2A1P68400 391 aaPredicted RBP6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 EPS8Q12929 822 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 VMACQ2NL98 169 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 TMEM44Q2T9K0 475 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 SYT14P1Q58G82 188 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 GTF2IRD2BQ6EKJ0 949 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 WBP2NLQ6ICG8 309 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 PLXDC2Q6UX71 529 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 GTF2IRD2Q86UP8 949 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 ZDHHC13Q8IUH4 622 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 C10orf111Q8N326 155 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 CLIP4Q8N3C7 705 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 C9orf106Q8NAJ2 232 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 FAM71CQ8NEG0 241 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 OR52E4Q8NGH9 312 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 MBD3L2Q8NHZ7 208 aaPredicted RBP6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 VANGL1Q8TAA9 524 aaPredicted RBP6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 FNDC9Q8TBE3 224 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 POC1BQ8TC44 478 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 BCAS4Q8TDM0 211 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 RASSF5Q8WWW0 418 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 CPNE4Q96A23 557 aaPredicted RBP6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 DDIT4LQ96D03 193 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 DNAJA3Q96EY1 480 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 ZNF845Q96IR2 970 aaPredicted RBP6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 TPD52L3Q96J77 140 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 ZFP3Q96NJ6 502 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 NPAS1Q99742 590 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 HOPXQ9BPY8 73 aaPredicted RBP6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 KCTD14Q9BQ13 255 aaPredicted RBP6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 KLHDC3Q9BQ90 382 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 SPAG4Q9NPE6 437 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 CHST11Q9NPF2 352 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 CTPS2Q9NRF8 586 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 NDE1Q9NXR1 346 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 CLCF1Q9UBD9 225 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 TESQ9UGI8 421 aaKnown RBP6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 TAGLN3Q9UI15 199 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 ADAM21Q9UKJ8 722 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 SLC9A8Q9Y2E8 581 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 TMED7Q9Y3B3 224 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 EMC9Q9Y3B6 208 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 ZNF175Q9Y473 711 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 GMEB1Q9Y692 573 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 GTF3C1Q12789 2109 aa6.49□□□□□ -1.37
NPLOC4-221ENST00000625705 TLN1Q9Y490 2541 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms