RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 ENKD1Q9H0I2 346 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 SCN8AQ9UQD0 1980 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 CKMP06732 381 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 VSIG10L2P0DP72 767 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 LUMP51884 338 aaPredicted RBP14.06□□□□□ -0.16
PMS1-221ENST00000624204 NDUFAF6Q330K2 333 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 C4orf46Q504U0 113 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 TMPRSS9Q7Z410 1059 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 LDLRAD3Q86YD5 345 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 SFT2D1Q8WV19 159 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 DIO2Q92813 273 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 PLEKHM1Q9Y4G2 1056 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 A0A1W2PS29 197 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 KHKP50053 298 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 YOD1Q5VVQ6 348 aaPredicted RBP14.06□□□□□ -0.16
PMS1-221ENST00000624204 ZNF600Q6ZNG1 722 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 OR1M1Q8NGA1 313 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 THAP6Q8TBB0 222 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 SMPDL3BQ92485 455 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 ZNF471Q9BX82 626 aaPredicted RBP14.06□□□□□ -0.16
PMS1-221ENST00000624204 SLC25A32Q9H2D1 315 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 GLIPR2Q9H4G4 154 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 FAM171A2A8MVW0 826 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 ITGA10O75578 1167 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 SC5DO75845 299 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 SOX2P48431 317 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 NRG3P56975 720 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 TAS2R43P59537 309 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 TSSK4Q6SA08 328 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 SSX6Q7RTT6 188 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 CCDC116Q8IYX3 515 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 RFLNBQ8N5W9 214 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 DNAAF1Q8NEP3 725 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 OR2AK2Q8NG84 335 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 KLF16Q9BXK1 252 aaPredicted RBP14.05□□□□□ -0.16
PMS1-221ENST00000624204 PBX4Q9BYU1 374 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 ASF1AQ9Y294 204 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 J3QRE1 110 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 KPNA3O00505 521 aaPredicted RBP14.05□□□□□ -0.16
PMS1-221ENST00000624204 TMPRSS11DO60235 418 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 ANXA11P50995 505 aaKnown RBP14.05□□□□□ -0.16
PMS1-221ENST00000624204 DEFB115Q30KQ5 88 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 ELFN2Q5R3F8 820 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 MANEAQ5SRI9 462 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 ZNF546Q86UE3 836 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 SPAG16Q8N0X2 631 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 AMER3Q8N944 861 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 STK35Q8TDR2 534 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 TEAD3Q99594 435 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 PDCD10Q9BUL8 212 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 PINK1Q9BXM7 581 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 KLHL28Q9NXS3 571 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 OR6C68A6NDL8 312 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 ACOD1A6NK06 481 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 SNRPGP15A8MWD9 76 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 SSX5O60225 188 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 AQP8O94778 261 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 S100A9P06702 114 aaKnown RBP14.05□□□□□ -0.16
PMS1-221ENST00000624204 CNR1P21554 472 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 FUT5Q11128 374 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 PAN3Q58A45 887 aaKnown RBP14.05□□□□□ -0.16
PMS1-221ENST00000624204 KHDRBS2Q5VWX1 349 aaKnown RBP14.05□□□□□ -0.16
PMS1-221ENST00000624204 OTPQ5XKR4 325 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 CMTM8Q8IZV2 173 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 SVBPQ8N300 66 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 SYNPRQ8TBG9 265 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 SLC41A3Q96GZ6 507 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 ZNF75AQ96N20 296 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 ASF1BQ9NVP2 202 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 SLC7A7Q9UM01 511 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 KCNK7Q9Y2U2 307 aa14.05□□□□□ -0.16
PMS1-221ENST00000624204 TMEM200CA6NKL6 621 aa14.04□□□□□ -0.16
PMS1-221ENST00000624204 CTDSPLO15194 276 aa14.04□□□□□ -0.16
PMS1-221ENST00000624204 EIF3GO75821 320 aaKnown RBP eCLIP14.04□□□□□ -0.16
PMS1-221ENST00000624204 SNAPC5O75971 98 aa14.04□□□□□ -0.16
PMS1-221ENST00000624204 NDUFB6O95139 128 aa14.04□□□□□ -0.16
PMS1-221ENST00000624204 ASGR2P07307 311 aa14.04□□□□□ -0.16
PMS1-221ENST00000624204 PSMB5P28074 263 aa14.04□□□□□ -0.16
PMS1-221ENST00000624204 HAAOP46952 286 aa14.04□□□□□ -0.16
PMS1-221ENST00000624204 PCBP4P57723 403 aaKnown RBP14.04□□□□□ -0.16
PMS1-221ENST00000624204 PRR5P85299 388 aa14.04□□□□□ -0.16
PMS1-221ENST00000624204 TGM3Q08188 693 aa14.04□□□□□ -0.16
PMS1-221ENST00000624204 TMEM115Q12893 351 aaPredicted RBP14.04□□□□□ -0.16
PMS1-221ENST00000624204 HENMT1Q5T8I9 393 aaKnown RBP14.04□□□□□ -0.16
PMS1-221ENST00000624204 CST9Q5W186 159 aa14.04□□□□□ -0.16
PMS1-221ENST00000624204 FUT10Q6P4F1 479 aa14.04□□□□□ -0.16
PMS1-221ENST00000624204 RTN4RL1Q86UN2 441 aaPredicted RBP14.04□□□□□ -0.16
PMS1-221ENST00000624204 MUC20Q8N307 709 aaPredicted RBP14.04□□□□□ -0.16
PMS1-221ENST00000624204 BRI3BPQ8WY22 251 aa14.04□□□□□ -0.16
PMS1-221ENST00000624204 UBE2E3Q969T4 207 aa14.04□□□□□ -0.16
PMS1-221ENST00000624204 S100A16Q96FQ6 103 aaKnown RBP14.04□□□□□ -0.16
PMS1-221ENST00000624204 RPP14O95059 124 aaKnown RBP14.04□□□□□ -0.16
PMS1-221ENST00000624204 SBK2P0C263 348 aa14.04□□□□□ -0.16
PMS1-221ENST00000624204 TEAD1P28347 426 aa14.04□□□□□ -0.16
PMS1-221ENST00000624204 MAP2K5Q13163 448 aa14.04□□□□□ -0.16
PMS1-221ENST00000624204 CBFBQ13951 182 aa14.04□□□□□ -0.16
PMS1-221ENST00000624204 RBMS2Q15434 407 aaKnown RBP14.04□□□□□ -0.16
PMS1-221ENST00000624204 PRAMEF14Q5SWL7 426 aa14.04□□□□□ -0.16
PMS1-221ENST00000624204 GDF7Q7Z4P5 450 aa14.04□□□□□ -0.16
PMS1-221ENST00000624204 FAM219AQ8IW50 185 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms