RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 BCAS1O75363 584 aaPredicted RBP11.09□□□□□ -0.63
LINC00963-217ENST00000624009 C1QCP02747 245 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 OPN1LWP04000 364 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 HRGP04196 525 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 BCHEP06276 602 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 PSMB1P20618 241 aaKnown RBP11.09□□□□□ -0.63
LINC00963-217ENST00000624009 ENPP1P22413 925 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 DNAJA1P31689 397 aaKnown RBP11.09□□□□□ -0.63
LINC00963-217ENST00000624009 DIO1P49895 249 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 RNF144AP50876 292 aaPredicted RBP11.09□□□□□ -0.63
LINC00963-217ENST00000624009 SNTB1Q13884 538 aaKnown RBP11.09□□□□□ -0.63
LINC00963-217ENST00000624009 P2RY6Q15077 328 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 GTDC1Q4AE62 458 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 AGKQ53H12 422 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 ZNF550Q7Z398 422 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 MTDHQ86UE4 582 aaKnown RBP11.09□□□□□ -0.63
LINC00963-217ENST00000624009 ADGRG3Q86Y34 549 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 ZNF610Q8N9Z0 462 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 ABHD3Q8WU67 409 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 CNOT9Q92600 299 aaKnown RBP11.09□□□□□ -0.63
LINC00963-217ENST00000624009 DDIT4LQ96D03 193 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 ZHX1-C8orf76Q96EF9 292 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 AURKBQ96GD4 344 aaPredicted RBP11.09□□□□□ -0.63
LINC00963-217ENST00000624009 TMEM19Q96HH6 336 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 OR5B2Q96R09 309 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 PSD2Q9BQI7 771 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 SPATA9Q9BWV2 254 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 ADAM19Q9H013 955 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 CCDC134Q9H6E4 229 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 TMEM38AQ9H6F2 299 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 EVA1AQ9H8M9 152 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 LEF1Q9UJU2 399 aaPredicted RBP11.09□□□□□ -0.63
LINC00963-217ENST00000624009 GPR52Q9Y2T5 361 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 USF3Q68DE3 2245 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 RAI1Q7Z5J4 1906 aaPredicted RBP11.09□□□□□ -0.63
LINC00963-217ENST00000624009 CLDN24A6NM45 220 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 EVPLLA8MZ36 301 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 SULT2B1O00204 365 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 NR5A2O00482 541 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 SMAD9O15198 467 aaKnown RBP11.08□□□□□ -0.64
LINC00963-217ENST00000624009 EIF1BO60739 113 aaKnown RBP11.08□□□□□ -0.64
LINC00963-217ENST00000624009 ARAFP10398 606 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 CD1EP15812 388 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 CRYGSP22914 178 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 PRKAR1BP31321 381 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 CCKARP32238 428 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 RYKP34925 604 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 ACAA2P42765 397 aaKnown RBP11.08□□□□□ -0.64
LINC00963-217ENST00000624009 KCNJ5P48544 419 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 IDH2P48735 452 aaKnown RBP11.08□□□□□ -0.64
LINC00963-217ENST00000624009 SLC16A1P53985 500 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 COPZ1P61923 177 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 H3F3AP84243 136 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 HSP90B2PQ58FF3 399 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 COQ5Q5HYK3 327 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 ABLIM2Q6H8Q1 611 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 REEP3Q6NUK4 255 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 PPP4R4Q6NUP7 873 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 DLEU7Q6UYE1 221 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 TFAP2EQ6VUC0 442 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 ZNF836Q6ZNA1 936 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 CDC20BQ86Y33 519 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 TUSC5Q8IXB3 177 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 MSRB3Q8IXL7 192 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 PIGXQ8TBF5 258 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 ROBO4Q8WZ75 1007 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 MBD6Q96DN6 1003 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 MED18Q9BUE0 208 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 SPATA5L1Q9BVQ7 753 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 POTEKPQ9BYX7 375 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 PIF1Q9H611 641 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 CTPS2Q9NRF8 586 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 ZNF446Q9NWS9 450 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 EMC3Q9P0I2 261 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 VAPAQ9P0L0 249 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 TMEM181Q9P2C4 612 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 ST6GALNAC2Q9UJ37 374 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 OSGIN1Q9UJX0 560 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 ING1Q9UK53 422 aaPredicted RBP11.08□□□□□ -0.64
LINC00963-217ENST00000624009 ZNF443Q9Y2A4 671 aaPredicted RBP11.08□□□□□ -0.64
LINC00963-217ENST00000624009 NDUFAF1Q9Y375 327 aa11.08□□□□□ -0.64
LINC00963-217ENST00000624009 TMED7-TICAM2A0A0A6YYA0 188 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 A0A0G2JND7 137 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 A0A1W2PNR3 127 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 C5orf58C9J3I9 102 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 GPR171O14626 319 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 ATP8B1O43520 1251 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 PGM3O95394 542 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 NPPAP01160 153 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 TROVE2P10155 538 aaKnown RBP eCLIP11.07□□□□□ -0.64
LINC00963-217ENST00000624009 NCF2P19878 526 aaPredicted RBP11.07□□□□□ -0.64
LINC00963-217ENST00000624009 ADSLP30566 484 aaPredicted RBP11.07□□□□□ -0.64
LINC00963-217ENST00000624009 SLC35A1P78382 337 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 RBBP4Q09028 425 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 RASGEF1BQ0VAM2 473 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 PAGE3Q5JUK9 113 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 GCNT6Q5T4J0 391 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 C1QTNF12Q5T7M4 302 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 WBP2NLQ6ICG8 309 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 STAC2Q6ZMT1 411 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms