RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 NPIPA8P0DM63 369 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 ADH7P40394 386 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 PBX2P40425 430 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 EIF1AXP47813 144 aaKnown RBP6.46□□□□□ -1.38
NEDD9-216ENST00000620854 TRAM2Q15035 370 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 AGERQ15109 404 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 GSG1Q2KHT4 349 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 TCTN1Q2MV58 587 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 HNRNPA1L2Q32P51 320 aaKnown RBP6.46□□□□□ -1.38
NEDD9-216ENST00000620854 SLC36A2Q495M3 483 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 DEFB134Q4QY38 66 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 TP53I3Q53FA7 332 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 ACSM3Q53FZ2 586 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 HES5Q5TA89 166 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 HBMQ6B0K9 141 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 TMPRSS9Q7Z410 1059 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 ESX1Q8N693 406 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 VOPP1Q96AW1 172 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 TRIM2Q9C040 744 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 A4GALTQ9NPC4 353 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 MGAT4CQ9UBM8 478 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 MLXQ9UH92 298 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 COPS3Q9UNS2 423 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 SERTM1A2A2V5 107 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 TRIM77I1YAP6 450 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF593O00488 134 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-216ENST00000620854 ARL6IP5O75915 188 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 RCBTB2O95199 551 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 RRASP10301 218 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 TYRP1P17643 537 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 MAP3K8P41279 467 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 RPS21P63220 83 aaKnown RBP6.46□□□□□ -1.38
NEDD9-216ENST00000620854 PITPNAQ00169 270 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 OPCMLQ14982 345 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 TMEM44Q2T9K0 475 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 COL28A1Q2UY09 1125 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 ENTPD8Q5MY95 495 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 PRAMEF17Q5VTA0 474 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 TANGO2Q6ICL3 276 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 CD200R1LQ6Q8B3 271 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 NHLRC1Q6VVB1 395 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 NLRC3Q7RTR2 1065 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 DCUN1D3Q8IWE4 304 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 NAXEQ8NCW5 288 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 ABHD4Q8TB40 342 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 CASTOR1Q8WTX7 329 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 GHSRQ92847 366 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 PRRC1Q96M27 445 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 DERL3Q96Q80 235 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 SLC25A18Q9H1K4 315 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 C6orf106Q9H6K1 298 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-216ENST00000620854 PLEKHA1Q9HB21 404 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 SDHAF2Q9NX18 166 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 FBXL2Q9UKC9 423 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 CBLCQ9ULV8 474 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 SLC7A7Q9UM01 511 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 AP1M2Q9Y6Q5 423 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 DOCK9Q9BZ29 2069 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 A0A1W2PQU0 124 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 TCRBV21S2A2A0A5A6 115 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 OR2AT4A6NND4 320 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 SURF4O15260 269 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 KRT33AO76009 404 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 TBX6O95947 436 aaPredicted RBP6.45□□□□□ -1.38
NEDD9-216ENST00000620854 ASGR2P07307 311 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 CTSLP07711 333 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 PGAM2P15259 253 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF823P16415 610 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 ANXA7P20073 488 aaKnown RBP6.45□□□□□ -1.38
NEDD9-216ENST00000620854 C5AR1P21730 350 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 IGFALSP35858 605 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 BTG1P62324 171 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 ARFRP1Q13795 201 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 LTB4RQ15722 352 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 DUSP6Q16828 381 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 TMEM255AQ5JRV8 349 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 HENMT1Q5T8I9 393 aaKnown RBP6.45□□□□□ -1.38
NEDD9-216ENST00000620854 C18orf63Q68DL7 685 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 KLHL24Q6TFL4 600 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 FAM83HQ6ZRV2 1179 aaPredicted RBP6.45□□□□□ -1.38
NEDD9-216ENST00000620854 CCDC36Q8IYA8 594 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 TRAM1L1Q8N609 369 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 OR2T33Q8NG76 320 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 OR52B4Q8NGK2 314 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 GNPDA2Q8TDQ7 276 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 SMPDL3BQ92485 455 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 YIPF5Q969M3 257 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 CHFRQ96EP1 664 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 METTL2AQ96IZ6 378 aaKnown RBP6.45□□□□□ -1.38
NEDD9-216ENST00000620854 PDCD1LG2Q9BQ51 273 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 GPR174Q9BXC1 333 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 SAV1Q9H4B6 383 aaPredicted RBP6.45□□□□□ -1.38
NEDD9-216ENST00000620854 HPF1Q9NWY4 346 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 KCMF1Q9P0J7 381 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 CA14Q9ULX7 337 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 FARSAQ9Y285 508 aaKnown RBP6.45□□□□□ -1.38
NEDD9-216ENST00000620854 TRPM7Q96QT4 1865 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 TRPM6Q9BX84 2022 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 C13orf42A0A1B0GVH6 325 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 OR5K3A6NET4 321 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms