RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 SLC37A1P57057 533 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 CXCR4P61073 352 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 PLAG1Q6DJT9 500 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 TMEM225Q6GV28 225 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 DACT3Q96B18 629 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-213ENST00000620219 KATNB1Q9BVA0 655 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 FN3KQ9H479 309 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 SEC61A2Q9H9S3 476 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 RPRD1BQ9NQG5 326 aaKnown RBP14.43□□□□□ -0.1
CPSF1-213ENST00000620219 ADAM18Q9Y3Q7 739 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 FMO6PO60774 539 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 OR7A5Q15622 319 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 CD226Q15762 336 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 CARD17Q5XLA6 110 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 ZNF613Q6PF04 617 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 KLBQ86Z14 1044 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 CDADC1Q9BWV3 514 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 TIMMDC1Q9NPL8 285 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 POLE3Q9NRF9 147 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 MN1Q10571 1320 aaPredicted RBP14.42□□□□□ -0.1
CPSF1-213ENST00000620219 C12orf71A8MTZ7 269 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 SLC30A4O14863 429 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 HTR2AP28223 471 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 HOXD12P35452 270 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 GPR85P60893 370 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 CRMP1Q14194 572 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 EBPQ15125 230 aaKnown RBP14.42□□□□□ -0.1
CPSF1-213ENST00000620219 QPRTQ15274 297 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 THEM6Q8WUY1 208 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 TRUB1Q8WWH5 349 aaKnown RBP14.42□□□□□ -0.1
CPSF1-213ENST00000620219 PITX2Q99697 317 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 RAB33BQ9H082 229 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 GALNT8Q9NY28 637 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 KCNE5Q9UJ90 142 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 ENPP5Q9UJA9 477 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 A0A1W2PPK0 400 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 C17orf51A8MQB3 221 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 SHISA8B8ZZ34 492 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 PNMTP11086 282 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 ZNF28P17035 718 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 MAKP20794 623 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 FPR3P25089 353 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 AQP6Q13520 282 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 SLX4IPQ5VYV7 408 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 HEPHL1Q6MZM0 1159 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 ANKRD37Q7Z713 158 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 OR8H2Q8N162 312 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 UFD1Q92890 307 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 MRPL48Q96GC5 212 aaKnown RBP14.42□□□□□ -0.1
CPSF1-213ENST00000620219 RACGAP1Q9H0H5 632 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 LANCL2Q9NS86 450 aa14.42□□□□□ -0.1
CPSF1-213ENST00000620219 NPIPA5E9PKD4 350 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 CLPXO76031 633 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 TNFSF15O95150 251 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 SLC6A19Q695T7 634 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 C1orf94Q6P1W5 598 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 C6orf15Q6UXA7 325 aaPredicted RBP14.41□□□□□ -0.1
CPSF1-213ENST00000620219 LINC00696Q6ZRV3 163 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 SCAIQ8N9R8 606 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 OR6N2Q8NGY6 317 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 MOSPD2Q8NHP6 518 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 SMAP2Q8WU79 429 aaPredicted RBP14.41□□□□□ -0.1
CPSF1-213ENST00000620219 PLGRKTQ9HBL7 147 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 RXFP3Q9NSD7 469 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 NPIPA1Q9UND3 350 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 SH3D21A4FU49 640 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 PCNX2A6NKB5 2137 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 PRODHO43272 600 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 EPPINO95925 133 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 OR2B6P58173 313 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 EFR3AQ14156 821 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 COL28A1Q2UY09 1125 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 SLITRK4Q8IW52 837 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 CARFQ8N187 725 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 TMEM163Q8TC26 289 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 CRELD1Q96HD1 420 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 OR5B2Q96R09 309 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 PRRG4Q9BZD6 226 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 ABI3Q9P2A4 366 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 GNG8Q9UK08 70 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 AZGP1P25311 298 aaKnown RBP14.41□□□□□ -0.1
CPSF1-213ENST00000620219 PYCR1P32322 319 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 HMGA2P52926 109 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 FUT7Q11130 342 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 ANKDD1AQ495B1 522 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 OTPQ5XKR4 325 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 MORN4Q8NDC4 146 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 OR10H5Q8NGA6 315 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 FKBP10Q96AY3 582 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 ZNF775Q96BV0 537 aaPredicted RBP14.41□□□□□ -0.1
CPSF1-213ENST00000620219 NXT1Q9UKK6 140 aaKnown RBP14.41□□□□□ -0.1
CPSF1-213ENST00000620219 TVP23AA6NH52 213 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 FAM25AB3EWG3 89 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 FAM25CB3EWG5 89 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 FAM25GB3EWG6 89 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 CDC42EP2O14613 210 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 SLC22A1O15245 554 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 P04436 131 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 ACVR1BP36896 505 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 SLC6A8P48029 635 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms